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Biocomputational Identification of sRNAs in Leptospira interrogans Serovar Lai.

• Authors : Tan, Xinq Yuan¹ (AUTHOR); Citartan, Marimuthu¹ (AUTHOR) ; Chinni, Suresh Venkata² (AUTHOR)

Subjects: *LEPTOSPIRA interrogans; *NON-coding RNA; *IRON

• Source: Indian Journal of Microbiology. Mar2023, Vol. 63 Issue 1, p33-41. 9p.

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The RNAz web server: prediction of thermodynamically stable and evolutionarily conserved RNA structures

• Authors : Andreas Gruber; Stefan Washietl; Richard Neuböck

Subjects: Web server; Molecular Sequence Data; education

• Source: University of Vienna-u:crisNucleic Acids Research

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The RNAz web server: prediction of thermodynamically stable and evolutionarily conserved RNA structures

• Authors : Gruber, Andreas R.; Neuböck, Richard; Hofacker, Ivo L.

Subjects: Articles

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A New Era in Vaccine Technology: mRNA-Based Vaccine Design

• Authors : Şahiner, Fatih; Aygar, İsmail Selçuk

Subjects: Optimizasyon; Replikon; Kararlılık

• Source: Journal of Molecular Virology and Immunology 1(3) 9-17

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In-vivo Delivery of mRNA-Based Vaccines and Administration Routes

• Authors : Gümral, Ramazan

Subjects: Optimizasyon; Lipit nanopartikül; Kararlılık

• Source: Journal of Molecular Virology and Immunology 1(3) 18-26

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Figure 6—figure supplement 3. cherub transcripts harbor conserved secondary RNA structures. ; (A) Overview of the genomic region of cherub. Two measurements of evolutionary conservation are depicted, PhyloP (Basewise conservation) and phastCons (Element conservation). Below, pairwise alignments of 27 D. species with D. melanogaster. Darker grey values indicate higher levels of conservation as scored by phastCons. Ns in the gap region are marked in yellow, one or more unalignable bases in the gap region are shown as double line and a discontinuity is highlighted with a blue bar. A scheme of the phylogenetic tree depicts the relationship between different Drosophila species (left). Sequence repeats and evolutionary conserved RNA structures are depicted. (B) Pairwise sequence identity of the cherub locus. Complete linkage clustering of the Euclidean distance of percent sequence identity between the genomic loci of different D. species. (C) RNAz-predicted stem structures (corresponding to red secondary structures in (A)) resemble Staufen binding sites. Shades of color indicate absence (dark) or presence (bright) of mutations preventing base pairing in some sequences of the alignment. For stem 4, multiple sequence alignments are shown.

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RNA Structure Elements Conserved between Mouse and 59 Other Vertebrates

• Authors : Bernhard C. Thiel; Roman Ochsenreiter; Veerendra P. Gadekar

Subjects: RNA secondary structure; conserved RNA structure elements; RNAzagris

• Source: Genes; Volume 9; Issue 8; Pages: 392

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RNAz 2.0: improved noncoding RNA detection

• Authors : Andreas R. Gruber; Sven Findeiss; Stefan Washietl ...

Subjects: RNA structure; noncoding RNA; structure conservation

• Source: http://www.bioinf.uni-leipzig.de/Publications/PREPRINTS/09-026.pdf.

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Pacific Symposium on Biocomputing 15:69-79(2010) RNAZ 2.0: IMPROVED NONCODING RNA DETECTION

• Authors : Andreas R. Gruber; Sven Findeiß; Stefan Washietl ...

Subjects: RNA structure; noncoding RNA; structure conservation

• Source: http://psb.stanford.edu/psb-online/proceedings/psb10/gruber.pdf.

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RNAZ 2.0: IMPROVED NONCODING RNA DETECTION

• Authors : Andreas R. Gruber; Sven Findeiß; Stefan Washietl ...

Subjects: RNA structure; noncoding RNA; structure conservation

• Source: http://www.cs.ubc.ca/%7Eirmtraud/cs_545/web_material/gruber_2010.pdf.

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