Search Results

The evaluation of transcription factor binding site prediction tools in human and Arabidopsis genomes

• Authors : Dinithi V. Wanniarachchi; Sameera Viswakula; Anushka M. Wickramasuriya

Subjects: Bioinformatics tools; Binding Sites; QH301-705.5

• Source: BMC BioinformaticsBMC Bioinformatics, Vol 25, Iss 1, Pp 1-25 (2024)

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MKDESIGNER and TASEQ: a set of tools for plant genotyping by targeted amplicon sequencing.

• Authors : Chigira, Koki¹ (AUTHOR) ; Yamasaki, Masanori² (AUTHOR) ; Ookawa, Taiichiro³ (AUTHOR)

• Source: BMC Bioinformatics. 7/11/2025, Vol. 26 Issue 1, p1-12. 12p.

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BarWare: efficient software tools for barcoded single-cell genomics.

• Authors : Swanson, Elliott^1,2 (AUTHOR); Reading, Julian¹ (AUTHOR); Graybuck, Lucas T.¹ (AUTHOR)

• Source: BMC Bioinformatics. 3/27/2022, Vol. 23 Issue 1, p1-14. 14p.

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Plaseval: a framework for comparing and evaluating plasmid detection tools.

• Authors : Mane, Aniket¹ (AUTHOR) ; Sanderson, Haley² (AUTHOR); White, Aaron P.³ (AUTHOR)

• Source: BMC Bioinformatics. 11/26/2024, Vol. 25 Issue 1, p1-26. 26p.

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Simulation study and comparative evaluation of viral contiguous sequence identification tools.

• Authors : Glickman, Cody^1,2 (AUTHOR) ; Hendrix, Jo^1,2 (AUTHOR); Strong, Michael^1,2 (AUTHOR)

• Source: BMC Bioinformatics. 6/15/2021 Supplement 3, Vol. 22, p1-19. 19p.

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Evaluation of variant calling tools for large plant genome re-sequencing

• Authors : Zhen Yao; Frank M. You; Amidou N’Diaye

Subjects: Variant calling; Sequence mapping tools; Variant calling tools

• Source: BMC Bioinformatics, Vol 21, Iss 1, Pp 1-16 (2020)

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Comparative Study of Single-stranded Oligonucleotides Secondary Structure Prediction Tools

• Authors : Thomas Binet; Séverine Padiolleau-Lefèvre; Stéphane Octave

Subjects: Single-stranded oligonucleotides; Secondary structure; Prediction

• Source: BMC Bioinformatics, Vol 24, Iss 1, Pp 1-20 (2023)

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A systematic comparison of human mitochondrial genome assembly tools

• Authors : Nirmal Singh Mahar; Rohit Satyam; Durai Sundar

Subjects: Mitochondria; Genome; Benchmark

• Source: BMC Bioinformatics, Vol 24, Iss 1, Pp 1-19 (2023)

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Mabs, a suite of tools for gene-informed genome assembly

• Authors : Mikhail I. Schelkunov

Subjects: Genome assembler; Genome assembly; Genome misassembly

• Source: BMC Bioinformatics, Vol 24, Iss 1, Pp 1-24 (2023)

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SynBioTools: a one-stop facility for searching and selecting synthetic biology tools

• Authors : Pengli Cai; Sheng Liu; Dachuan Zhang

Subjects: Synthetic biology; Computational tool; Database

• Source: BMC Bioinformatics, Vol 24, Iss 1, Pp 1-11 (2023)

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