Search Results

Cont-ID: detection of sample cross-contamination in viral metagenomic data.

• Authors : Rollin, Johan; Rong, Wei; Massart, Sébastien

Subjects: Bioinformatic; Contamination; Detection

• Source: BMC Biology, 21 (1), 217 (2023-10-13)

Record details

Developmental Validation of a MPS Workflow with a PCR-Based Short Amplicon Whole Mitochondrial Genome Panel

• Authors : Cihlar, Jennifer Churchill; Amory, Christina; Lagace, Robert

Subjects: Ion Torrent; SWGDAM guidelines; developmental validation

• Source: Genes (Basel)

Record details

Primer, Pipelines, Parameters:Issues in 16S rRNA Gene Sequencing

• Authors : Abellan-Schneyder, Isabel; Matchado, Monica S.; Reitmeier, Sandra

Subjects: 16S rRNA gene sequencing; amplicon sequencing; bioinformatic settings

• Source: Abellan-Schneyder, I, Matchado, M S, Reitmeier, S, Sommer, A, Sewald, Z, Baumbach, J, List, M & Neuhaus, K 2021, 'Primer, Pipelines, Parameters : Issues in 16S rRNA Gene

Record details

KLK6 (kallikrein-related peptidase 6)

• Authors : Karousi, Paraskevi; Kontos, Christos K; Scorilas, Andreas ...

Subjects: Kallikreins; KlK6; gastric cancer

Record details

Breast cancer PAM50 signature: correlation and concordance between RNA-Seq and digital multiplexed gene expression technologies in a triple negative breast cancer series

• Authors : Antoni C. Picornell; Isabel Echavarría; Enrique Álvarez ...

Subjects: Male; FOS: Computer and information sciences; 0301 basic medicine

• Source: BMC GenomicsRISalud-ANDALUCIA. Repositorio Institucional de Salud de AndalucíainstnameDigital.CSIC. Repositorio Institucional del CSICConsejo Superior de Investigaciones

Record details

Systematic evaluation of error rates and causes in short samples in next-generation sequencing.

• Authors : Pfeiffer, Franziska; Gröber, Carsten; Blank, Michael

Subjects: info:eu-repo/classification/ddc/600; Computational Biology; High-Throughput Nucleotide Sequencing: methodsDE

• Source: Scientific reports 8(1), 10950 (2018). doi:10.1038/s41598-018-29325-6

Record details

Comparison of single-nucleotide variants identified by Illumina and Oxford Nanopore technologies in the context of a potential outbreak of Shiga toxin–producing Escherichia coli

• Authors : David R Greig; Claire Jenkins; Saheer Gharbia

Subjects: 0301 basic medicine; Genotype; 0206 medical engineering

• Source: Gigascience

Record details

GBStools: A Statistical Method for Estimating Allelic Dropout in Reduced Representation Sequencing Data

• Authors : Thomas F. Cooke; Muh‐Ching Yee; Marina Muzzio ...

Subjects: 0301 basic medicine; Artificial intelligence; Genotyping Techniques

• Source: PLoS GenetPLoS Genetics, Vol 12, Iss 2, p e1005631 (2016)CONICET Digital (CONICET)Consejo Nacional de Investigaciones Científicas y TécnicasSEDICI (UNLP)Universidad

Record details