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Bioaerosols in swine confinement buildings: A metaproteomic view.

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  • Additional Information
    • Source:
      Publisher: Society for Applied Microbiology and Blackwell Pub Country of Publication: United States NLM ID: 101499207 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1758-2229 (Electronic) Linking ISSN: 17582229 NLM ISO Abbreviation: Environ Microbiol Rep Subsets: MEDLINE
    • Publication Information:
      Original Publication: [Hoboken, N.J.] : Society for Applied Microbiology and Blackwell Pub., c2009-
    • Subject Terms:
    • Abstract:
      Swine confinement buildings represent workplaces with high biological air pollution. It is suspected that individual components of inhalable air are causatives of chronic respiratory disease that are regularly detected among workers. In order to understand the relationship between exposure and stress, it is necessary to study the components of bioaerosols in more detail. For this purpose, bioaerosols from pig barns were collected on quartz filters and analysed via a combinatorial approach of 16S rRNA amplicon sequencing and metaproteomics. The study reveals the presence of peptides from pigs, their feed and microorganisms. The proportion of fungal peptides detected is considered to be underrepresented compared to bacterial peptides. In addition, the metaproteomic workflow enabled functional predictions about the discovered peptides. Housekeeping proteins were found in particular, but also evidence for the presence of bacterial virulence factors (e.g., serralysin-like metalloprotease) as well as plant (e.g., chitinase) and fungal allergens (e.g., alt a10). Metaproteomic analyses can thus be used to identify factors that may be relevant to the health of pig farmers. Accordingly, such studies could be used in the future to assess the adverse health potential of an occupationally relevant bioaerosol and help consider defined protective strategies for workers.
      (© 2023 Bundesanstalt für Arbeitsschutz und Arbeitsmedizin and The Authors. Environmental Microbiology Reports published by Applied Microbiology International and John Wiley & Sons Ltd.)
    • References:
      Environ Microbiol Rep. 2023 Dec;15(6):684-697. (PMID: 37919246)
      Appl Environ Microbiol. 2014 Jun;80(11):3296-304. (PMID: 24632262)
      Int J Hyg Environ Health. 2017 Aug;220(6):974-983. (PMID: 28669773)
      Environ Sci Technol. 2015 Jun 16;49(12):7356-63. (PMID: 26018772)
      Nat Methods. 2007 Nov;4(11):923-5. (PMID: 17952086)
      Anal Bioanal Chem. 2016 Sep;408(23):6337-48. (PMID: 27411545)
      Sci Total Environ. 2020 Mar 15;708:134921. (PMID: 31771854)
      Int J Hyg Environ Health. 2018 Mar;221(2):134-173. (PMID: 29133137)
      J Biol Inorg Chem. 2002 Jun;7(6):600-10. (PMID: 12072965)
      Trends Microbiol. 2021 Jan;29(1):19-27. (PMID: 32593503)
      Nucleic Acids Res. 2013 Jan 7;41(1):e1. (PMID: 22933715)
      FEMS Microbiol Ecol. 2012 Dec;82(3):666-77. (PMID: 22738186)
      Allergy. 2017 Sep;72(9):1423-1429. (PMID: 28328103)
      Environ Microbiol. 2012 Jun;14(6):1420-31. (PMID: 22414212)
      J Clin Med. 2019 Nov 01;8(11):. (PMID: 31683983)
      J Antimicrob Chemother. 2011 Jan;66 Suppl 1:i5-14. (PMID: 21177404)
      BMC Microbiol. 2019 Apr 29;19(1):83. (PMID: 31035941)
      Ann Occup Hyg. 2010 Nov;54(8):934-43. (PMID: 20720091)
      J Am Soc Mass Spectrom. 2016 Nov;27(11):1719-1727. (PMID: 27572102)
      Animals (Basel). 2019 Mar 12;9(3):. (PMID: 30871116)
      J Occup Environ Hyg. 2010 Feb;7(2):94-102. (PMID: 19953413)
      mSystems. 2019 May 21;4(3):. (PMID: 31117019)
      Exp Mol Med. 2019 Dec 11;51(12):1-6. (PMID: 31827063)
      Nucleic Acids Res. 2015 Jan;43(Database issue):D593-8. (PMID: 25414355)
      PLoS One. 2014 Nov 13;9(11):e112897. (PMID: 25393011)
      Pneumologie. 2000 Jan;54(1):37-42. (PMID: 10705759)
      Nucleic Acids Res. 2014 Jan;42(Database issue):D643-8. (PMID: 24293649)
      Nat Methods. 2016 Jul;13(7):581-3. (PMID: 27214047)
      Microorganisms. 2020 Nov 28;8(12):. (PMID: 33260576)
      Appl Environ Microbiol. 2018 Jan 12;84(6):. (PMID: 29330190)
      Postepy Dermatol Alergol. 2013 Oct;30(5):311-5. (PMID: 24353492)
      J Am Soc Mass Spectrom. 1994 Nov;5(11):976-89. (PMID: 24226387)
      Nucleic Acids Res. 2021 Jan 8;49(D1):D344-D354. (PMID: 33156333)
      Lancet. 2001 Oct 6;358(9288):1129-33. (PMID: 11597666)
      Nat Biotechnol. 2018 Apr;36(4):359-367. (PMID: 29553575)
      Curr Opin Allergy Clin Immunol. 2003 Jun;3(3):205-9. (PMID: 12840704)
      PLoS Pathog. 2015 Jun 11;11(6):e1004833. (PMID: 26066650)
      Microorganisms. 2020 Oct 14;8(10):. (PMID: 33066697)
      J Allergy Clin Immunol. 2013 Nov;132(5):1239-41. (PMID: 23987793)
      Int Arch Allergy Immunol. 2008;145(1):58-86. (PMID: 17709917)
      AIHAJ. 2000 Jan-Feb;61(1):56-63. (PMID: 10772615)
      Ecotoxicol Environ Saf. 2021 Apr 1;212:112006. (PMID: 33556810)
      Int Arch Occup Environ Health. 2020 Jul;93(5):659-668. (PMID: 32025796)
      J Proteomics. 2009 Apr 13;72(3):501-10. (PMID: 19367736)
      Curr Allergy Asthma Rep. 2018 Oct 5;18(12):65. (PMID: 30291457)
      Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6. (PMID: 23193283)
      J Proteome Res. 2019 Feb 1;18(2):606-615. (PMID: 30465426)
      Proteomics. 2015 Apr;15(8):1437-42. (PMID: 25477242)
      J Clin Microbiol. 2010 Sep;48(9):3138-45. (PMID: 20660219)
      ScientificWorldJournal. 2014 Feb 16;2014:543195. (PMID: 24696647)
      Microbiome. 2021 Aug 21;9(1):175. (PMID: 34419147)
      Environ Microbiol. 2010 Sep;12(9):2398-410. (PMID: 20438582)
      BMC Bioinformatics. 2011 Sep 30;12:385. (PMID: 21961884)
      New Phytol. 2010 Apr;186(2):281-5. (PMID: 20409185)
      Eur Respir J. 2000 Mar;15(3):560-5. (PMID: 10759453)
      Proteomics. 2019 Dec;19(23):e1900192. (PMID: 31532911)
      Curr Microbiol. 2020 Nov;77(11):3310-3320. (PMID: 32915289)
      Proteomics. 2019 Dec;19(23):e1900152. (PMID: 31315163)
      BMC Vet Res. 2019 May 24;15(1):172. (PMID: 31126262)
      PLoS Comput Biol. 2021 Nov 8;17(11):e1009581. (PMID: 34748542)
      Ann Occup Hyg. 2010 Mar;54(2):217-27. (PMID: 20042465)
      Postgrad Med J. 2002 Apr;78(918):216-24. (PMID: 11930024)
      Appl Environ Microbiol. 2009 Sep;75(17):5445-50. (PMID: 19561186)
      Rapid Commun Mass Spectrom. 2021 May 20;:e9128. (PMID: 34015160)
      Nat Methods. 2019 Jun;16(6):509-518. (PMID: 31133760)
      FEMS Microbiol Ecol. 2012 May;80(2):390-401. (PMID: 22242889)
      Bioinformatics. 2016 Jun 1;32(11):1746-8. (PMID: 26819472)
      J Bacteriol. 2003 Jul;185(13):3735-44. (PMID: 12813066)
      J Allergy Clin Immunol. 2019 Jun;143(6):2305-2307. (PMID: 30796982)
      Animals (Basel). 2021 Jul 20;11(7):. (PMID: 34359268)
      J Clin Microbiol. 2006 Jun;44(6):2242-3. (PMID: 16757629)
      Nucleic Acids Res. 2019 Jan 8;47(D1):D330-D338. (PMID: 30395331)
      Nucleic Acids Res. 2022 Jan 7;50(D1):D543-D552. (PMID: 34723319)
      Res Microbiol. 2017 Jul - Aug;168(6):567-574. (PMID: 28366837)
      Environ Sci Pollut Res Int. 2022 Apr;29(18):26992-27006. (PMID: 34921652)
      Environ Microbiol. 2008 Mar;10(3):665-75. (PMID: 18237302)
      Nat Biotechnol. 2019 Aug;37(8):852-857. (PMID: 31341288)
      Environ Microbiol. 2021 Nov;23(11):7201-7213. (PMID: 34655283)
    • Accession Number:
      0 (RNA, Ribosomal, 16S)
      0 (Aerosols)
      0 (Peptides)
    • Publication Date:
      Date Created: 20231102 Date Completed: 20231127 Latest Revision: 20231127
    • Publication Date:
      20231215
    • Accession Number:
      PMC10667663
    • Accession Number:
      10.1111/1758-2229.13208
    • Accession Number:
      37919246