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A study of algorithms relating distributive lattices, median graphs, and Formal Concept Analysis

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  • Additional Information
    • Contributors:
      Knowledge representation, reasonning (ORPAILLEUR); Inria Nancy - Grand Est; Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Department of Natural Language Processing & Knowledge Discovery (LORIA - NLPKD); Laboratoire Lorrain de Recherche en Informatique et ses Applications (LORIA); Institut National de Recherche en Informatique et en Automatique (Inria)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche en Informatique et en Automatique (Inria)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Laboratoire Lorrain de Recherche en Informatique et ses Applications (LORIA); Institut National de Recherche en Informatique et en Automatique (Inria)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS); Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA); Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes); Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université de Bretagne Sud (UBS)-École normale supérieure - Rennes (ENS Rennes)-Institut National de Recherche en Informatique et en Automatique (Inria)-CentraleSupélec-Centre National de la Recherche Scientifique (CNRS)-IMT Atlantique (IMT Atlantique); Institut Mines-Télécom Paris (IMT)-Institut Mines-Télécom Paris (IMT)
    • Publication Information:
      HAL CCSD
      Elsevier
    • Publication Date:
      2022
    • Collection:
      Université de Lorraine: HAL
    • Abstract:
      International audience ; In this paper, we study structures such as distributive lattices, distributive semilattices, and median graphs from an algorithmic point of view. Such structures are very useful in classification and phylogeny for representing lineage relationships for example. A distributive lattice can be considered as a median graph while a distributive ∨-semilattice can be considered as a median graph provided that some conditions holding on triple of elements are satisfied. Starting from a lattice structure with different representations, we study the problem of building a median graph from such structures. We make precise and propose algorithms for checking how a lattice can be distributive and can be a median graph. Then, we adapt the problem to semilattices as a lattice where the bottom element is removed is a ∨-semilattice. We also state the problem in terms of Formal Concept Analysis and the representation of a lattice as a formal context, i.e., a binary table. Moreover, we also propose as input a system of implications such as the Duquenne-Guigues basis of a lattice, and we study how to compute such a basis for a distributive semilattice. In the paper, we provide algorithms and examples which illustrate the difficulties related to these different classification tasks. In particular, the minimality of the output lattices is a condition which is hard to ensure and which cannot be always achieved.
    • Relation:
      hal-03537744; https://inria.hal.science/hal-03537744; https://inria.hal.science/hal-03537744/document; https://inria.hal.science/hal-03537744/file/Considerations_on_median_graph_computation_using_FCA.pdf
    • Accession Number:
      10.1016/j.ijar.2021.12.011
    • Online Access:
      https://doi.org/10.1016/j.ijar.2021.12.011
      https://inria.hal.science/hal-03537744
      https://inria.hal.science/hal-03537744/document
      https://inria.hal.science/hal-03537744/file/Considerations_on_median_graph_computation_using_FCA.pdf
    • Rights:
      info:eu-repo/semantics/OpenAccess
    • Accession Number:
      edsbas.145476D8