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Collection : Portail Hal De L'universite Lumiere Lyon 2

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Conference

Aevol 4b: Bridging the gap between artificial life and bioinformatics

Authors : Daudey, Hugo; Parsons, David, P; Tannier, Eric ...

Subjects: [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]Copenhague; Denmark

Source: ALIFE ISAL 2024 Complete Proceedings ; International Conference for Artificial Life (ALIFE ISAL 2024) ; https://hal.science/hal-04667220 ; International Conference for Artificial Life (ALIFE ISAL

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Conference

Detecting gene regulatory network rewiring as changes in marker regulatory associations using only single-cell gene expression data

Authors : Chabrier, Lisa; Crombach, Anton; Peignier, Sergio ...

Subjects: Explainable ML; SHAP values; Gene regulatory networkAbu Dhabi; United Arab Emirates

Source: IEEE 12th Data Mining in Biomedical Informatics and Healthcare Workshop (DMBIH'24) at ICDM'24 ; https://inria.hal.science/hal-04808464 ; IEEE 12th Data Mining in Biomedical Informatics and Healthcare

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Conference

Single-cell multi-omics data integration powered by PCA-like autoencoders

Authors : Peyric, Thibaut; Crombach, Anton; Guyet, Thomas ...

Subjects: Single cell; multi-omics; AutoencodersToulouse; France

Source: JOBIM 2024 ; https://hal.science/hal-04750060 ; JOBIM 2024, Jun 2024, Toulouse, France

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Academic Journal

A Rigorous Framework to Classify the Post-Duplication Fate of Paralogous Genes (extended version)

Authors : Kalhor, Reza; Beslon, Guillaume; Lafond, Manuel ...

Subjects: Gene duplication Duplication fates Classification Paralogy and Simulation; Gene duplication; Duplication fates

Source: ISSN: 1066-5277.

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Academic Journal

A Rigorous Framework to Classify the Post-Duplication Fate of Paralogous Genes (extended version)

Authors : Kalhor, Reza; Beslon, Guillaume; Lafond, Manuel ...

Subjects: Gene duplication Duplication fates Classification Paralogy and Simulation; Gene duplication; Duplication fates

Source: ISSN: 1066-5277.

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Conference

Classifying the Post-duplication Fate of Paralogous Genes

Authors : Kalhor, Reza; Beslon, Guillaume; Lafond, Manuel ...

Subjects: Gene duplication; Duplication fates; ClassificationIstanbul; Turkey

Source: Lecture Notes in Computer Science ; RECOMB-CG 2023 - 20th conference on Comparative Genomics ; https://hal.science/hal-04239853 ; RECOMB-CG 2023 - 20th conference on Comparative Genomics, Apr 2023,

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Academic Journal

Host-symbiont-gene phylogenetic reconciliation

Authors : Menet, Hugo; Nguyen Trung, Alexia; Daubin, Vincent ...

Subjects: [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]

Source: ISSN: 2804-3871.

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Academic Journal

Quantifying membrane binding and diffusion with fluorescence correlation spectroscopy diffusion laws

Authors : Mouttou, Anita; Bremaud, Erwan; Noero, Julien ...

Subjects: [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]; [SDV.BBM.BP]Life Sciences [q-bio]/Biochemistry; Molecular Biology/Biophysics

Source: ISSN: 0006-3495.

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Academic Journal

Thirdkind: displaying phylogenetic encounters beyond 2-level reconciliation

Authors : Penel, Simon; Menet, Hugo; Tricou, Théo ...

Subjects: [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]

Source: ISSN: 1367-4803.

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Dissertation/ Thesis

On the bioinformatics of automata networks ; Sur la bio-informatique des réseaux d'automates

Authors : Sené, Sylvain;

Subjects: Theoretical bioinformatics; automata networks; discrete dynamical systems

Source: https://theses.hal.science/tel-00759287 ; Mathématique discrète [cs.DM]. Université d'Evry-Val d'Essonne, 2012.

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