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Academic Journal

Escherichia coli adaptation under prolonged resource exhaustion is characterized by extreme parallelism and frequent historical contingency.

  • Authors : Zion S; Rachel & Menachem Mendelovitch Evolutionary Processes of Mutation & Natural Selection Research Laboratory, Department of Genetics and Developmental Biology, the Ruth and Bruce Rappaport Faculty of Medicine, Technion-Israel Institute of Technology, Haifa, Israel.; Katz S

Subjects: Escherichia coli*/Escherichia coli*/Escherichia coli*/genetics ; Adaptation, Physiological*/Adaptation, Physiological*/Adaptation, Physiological*/genetics; Mutation

  • Source: PLoS genetics [PLoS Genet] 2024 Jun 17; Vol. 20 (6), pp. e1011333. Date of Electronic Publication: 2024 Jun 17 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101239074 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Comparing antimicrobial resistant genes and phenotypes across multiple sequencing platforms and assays for Enterobacterales clinical isolates.

  • Authors : Rose R; BioInfoExperts LLC, 718 Bayou Lane, Thibodaux, LA, 70301, USA. .; FoxSeq, LLC, Thibodaux, LA, USA. .

Subjects: Carbapenems*/Carbapenems*/Carbapenems*/pharmacology ; Anti-Bacterial Agents*/Anti-Bacterial Agents*/Anti-Bacterial Agents*/pharmacology; Phenotype

  • Source: BMC microbiology [BMC Microbiol] 2023 Aug 18; Vol. 23 (1), pp. 225. Date of Electronic Publication: 2023 Aug 18.Publisher: BioMed Central Country of Publication: England NLM ID: 100966981 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2180

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Academic Journal

Metabolic adaptation to consume butyrate under prolonged resource exhaustion.

  • Authors : Katz S; Rachel & Menachem Mendelovitch Evolutionary Processes of Mutation & Natural Selection Research Laboratory, Department of Genetics and Developmental Biology, the Ruth and Bruce Rappaport Faculty of Medicine, Technion-Israel Institute of Technology, Haifa, Israel.; Grajeda-Iglesias C

Subjects: Escherichia coli*/Escherichia coli*/Escherichia coli*/metabolism ; Butyrates*/Butyrates*/Butyrates*/metabolism; Adaptation, Physiological/Adaptation, Physiological/Adaptation, Physiological/genetics

  • Source: PLoS genetics [PLoS Genet] 2023 Jun 22; Vol. 19 (6), pp. e1010812. Date of Electronic Publication: 2023 Jun 22 (Print Publication: 2023).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101239074 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Personal Reflections on Some Early Work in Evolving Strategies in the Iterated Prisoner's Dilemma.

  • Authors : Fogel DB; Natural Selection, Inc., 17085 Via Del Campo, San Diego, USA .

Subjects: Game Theory* ; Prisoner Dilemma*; Anniversaries and Special Events

  • Source: Evolutionary computation [Evol Comput] 2023 Jun 01; Vol. 31 (2), pp. 157-161.Publisher: MIT Press Country of Publication: United States NLM ID: 9513581 Publication Model: Print Cited Medium: Internet ISSN: 1530-9304

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Academic Journal

The Persistence of HIV Diversity, Transcription, and Nef Protein in Kaposi's Sarcoma Tumors during Antiretroviral Therapy.

  • Authors : Nolan DJ; Bioinfoexperts, LLC, Thibodaux, LA 70301, USA.; Rose R

Subjects: Herpesvirus 8, Human*/Herpesvirus 8, Human*/Herpesvirus 8, Human*/genetics ; HIV Infections*/HIV Infections*/HIV Infections*/complications ; HIV Infections*/HIV Infections*/HIV Infections*/drug therapy

  • Source: Viruses [Viruses] 2022 Dec 13; Vol. 14 (12). Date of Electronic Publication: 2022 Dec 13.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101509722 Publication Model: Electronic Cited Medium: Internet ISSN: 1999-4915

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Academic Journal

Density-dependent effects are the main determinants of variation in growth dynamics between closely related bacterial strains.

  • Authors : Hilau S; Department of Physiology, Biophysics and Systems Biology, the Ruth and Bruce Rappaport Faculty of Medicine, Technion-Israel Institute of Technology, Haifa, Israel.; Rachel & Menachem Mendelovitch Evolutionary Processes of Mutation & Natural Selection Research Laboratory, Department of Genetics and Developmental Biology, the Ruth and Bruce Rappaport Faculty of Medicine, Technion-Israel Institute of Technology, Haifa, Israel.

Subjects: Escherichia coli* ; Adaptation, Physiological*

  • Source: PLoS computational biology [PLoS Comput Biol] 2022 Oct 03; Vol. 18 (10), pp. e1010565. Date of Electronic Publication: 2022 Oct 03 (Print Publication: 2022).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Reversion is most likely under high mutation supply when compensatory mutations do not fully restore fitness costs.

  • Authors : Pennings PS; Department of Biology, San Francisco State University, San Francisco, CA 94132, USA.; Ogbunugafor CB

Subjects: Genetics, Population* ; Mutation Rate*; Adaptation, Physiological/Adaptation, Physiological/Adaptation, Physiological/genetics

  • Source: G3 (Bethesda, Md.) [G3 (Bethesda)] 2022 Aug 25; Vol. 12 (9).Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Characterising the mechanisms underlying genetic resistance to amoebic gill disease in Atlantic salmon using RNA sequencing.

  • Authors : Robledo D; The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Midlothian, EH25 9RG, UK. .; Hamilton A

Subjects: Amebiasis/Amebiasis/Amebiasis/*genetics ; Fish Diseases/Fish Diseases/Fish Diseases/*genetics ; Salmo salar/Salmo salar/Salmo salar/*genetics Amoebic gill disease

  • Source: BMC genomics [BMC Genomics] 2020 Mar 30; Vol. 21 (1), pp. 271. Date of Electronic Publication: 2020 Mar 30.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Academic Journal

Genome-Wide Association and Genomic Selection for Resistance to Amoebic Gill Disease in Atlantic Salmon.

  • Authors : Robledo D; The Roslin Institute and Royal (Dick) School of Veterinary Studies and.; Matika O

Subjects: Genome-Wide Association Study* ; Genomics*; Amoeba/Amoeba/Amoeba/*physiology

  • Source: G3 (Bethesda, Md.) [G3 (Bethesda)] 2018 Mar 28; Vol. 8 (4), pp. 1195-1203. Date of Electronic Publication: 2018 Mar 28.Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Bacterial intra-species gene loss occurs in a largely clocklike manner mostly within a pool of less conserved and constrained genes.

  • Authors : Bolotin E; Rachel &Menachem Mendelovitch Evolutionary Processes of Mutation &Natural Selection Research Laboratory, Department of Genetics and Developmental Biology, the Ruth and Bruce Rappaport Faculty of Medicine, Technion-Israel Institute of Technology, Haifa 31096, Israel.; Hershberg R

Subjects: Bacteria/Bacteria/Bacteria/*genetics ; Genes, Bacterial/Genes, Bacterial/Genes, Bacterial/*genetics ; Genome, Bacterial/Genome, Bacterial/Genome, Bacterial/*genetics

  • Source: Scientific reports [Sci Rep] 2016 Oct 13; Vol. 6, pp. 35168. Date of Electronic Publication: 2016 Oct 13.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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