Search Results

GAPS: a geometric attention-based network for peptide binding site identification by the transfer learning approach.

• Authors : Zhu, Cheng¹ (AUTHOR); Zhang, Chengyun² (AUTHOR); Shang, Tianfeng² (AUTHOR)

• Source: Briefings in Bioinformatics. Jul2024, Vol. 25 Issue 4, p1-15. 15p.

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ULDNA: integrating unsupervised multi-source language models with LSTM-attention network for high-accuracy protein–DNA binding site prediction.

• Authors : Zhu, Yi-Heng¹ (AUTHOR); Liu, Zi² (AUTHOR); Liu, Yan³ (AUTHOR)

• Source: Briefings in Bioinformatics. Mar2024, Vol. 25 Issue 2, p1-10. 10p.

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Quantitative model for genome-wide cyclic AMP receptor protein binding site identification and characteristic analysis.

• Authors : Chen, Yigang^1,2 (AUTHOR); Lin, Yang-Chi-Dung^1,2 (AUTHOR); Luo, Yijun¹ (AUTHOR)

• Source: Briefings in Bioinformatics. May2023, Vol. 24 Issue 3, p1-12. 12p.

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AlphaFold2-aware protein–DNA binding site prediction using graph transformer.

• Authors : Yuan, Qianmu¹ (AUTHOR); Chen, Sheng¹ (AUTHOR); Rao, Jiahua¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Mar2022, Vol. 23 Issue 2, p1-12. 12p.

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Addressing data imbalance problems in ligand-binding site prediction using a variational autoencoder and a convolutional neural network.

• Authors : Nguyen, Trinh-Trung-Duong¹ (AUTHOR); Nguyen, Duc-Khanh² (AUTHOR); Ou, Yu-Yen³ (AUTHOR)

• Source: Briefings in Bioinformatics. Nov2021, Vol. 22 Issue 6, p1-10. 10p.

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Identification of the RNase-binding site of SARS-CoV-2 RNA for anchor primer-PCR detection of viral loading in 306 COVID-19 patients

• Authors : Haixiao Chen; Yanjun Zhang; Chengshui Chen

Subjects: Male; 0303 health sciences; Binding Sites

• Source: Briefings in Bioinformatics

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Alignment-free metal ion-binding site prediction from protein sequence through pretrained language model and multi-task learning

• Authors : Qianmu Yuan; Sheng Chen; Yu Wang

Subjects: Ions; 0301 basic medicine; Binding Sites

• Source: Briefings in Bioinformatics. 23

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AlphaFold2-aware protein-DNA binding site prediction using graph transformer

• Authors : Qianmu Yuan; Sheng Chen; Jiahua Rao

Subjects: 0301 basic medicine; 03 medical and health sciences; Binding Sites

• Source: Briefings in Bioinformatics. 23

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Binding site matching in rational drug design: algorithms and applications.

• Authors : Naderi, Misagh¹ (AUTHOR); Lemoine, Jeffrey Mitchell^1,2 (AUTHOR); Govindaraj, Rajiv Gandhi¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Nov2019, Vol. 20 Issue 6, p2167-2184. 18p.

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circRNA-binding protein site prediction based on multi-view deep learning, subspace learning and multi-view classifier.

• Authors : Li, Hui¹ (AUTHOR); Deng, Zhaohong² (AUTHOR) ; Yang, Haitao¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Jan2022, Vol. 23 Issue 1, p1-14. 14p.

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