Search Results

Should we really use graph neural networks for transcriptomic prediction?

• Authors : Brouard, Céline¹ (AUTHOR) ; Mourad, Raphaël^1,2 (AUTHOR); Vialaneix, Nathalie¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Mar2024, Vol. 25 Issue 2, p1-13. 13p.

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DeepSTF: predicting transcription factor binding sites by interpretable deep neural networks combining sequence and shape.

• Authors : Ding, Pengju¹ (AUTHOR); Wang, Yifei¹ (AUTHOR); Zhang, Xinyu¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Jul2023, Vol. 24 Issue 4, p1-11. 11p.

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An overview on nucleic-acid G-quadruplex prediction: from rule-based methods to deep neural networks.

• Authors : Elimelech-Zohar, Karin¹ (AUTHOR); Orenstein, Yaron^1,2 (AUTHOR)

• Source: Briefings in Bioinformatics. Jul2023, Vol. 24 Issue 4, p1-11. 11p.

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Clair3-trio: high-performance Nanopore long-read variant calling in family trios with trio-to-trio deep neural networks.

• Authors : Su, Junhao¹ (AUTHOR); Zheng, Zhenxian¹ (AUTHOR); Ahmed, Syed Shakeel¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Sep2022, Vol. 23 Issue 5, p1-12. 12p.

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Multi-view learning framework for predicting unknown types of cancer markers via directed graph neural networks fitting regulatory networks

• Authors : Xin-Fei Wang; Lan Huang; Yan Wang

Subjects: MicroRNAs; Neoplasms; Biomarkers, Tumor

• Source: Brief Bioinform

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DGCL: dual-graph neural networks contrastive learning for molecular property prediction

• Authors : Xiuyu Jiang; Liqin Tan; Qingsong Zou

Subjects: Machine Learning; Problem Solving Protocol; Computational Biology

• Source: Brief Bioinform

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Gene Expression Prediction from Histology Images via Hypergraph Neural Networks

• Authors : Bo Li; Yong Zhang; Qing Wang

Subjects: Gene Expression Profiling; Neoplasms; Image Processing, Computer-Assisted

• Source: Brief Bioinform

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Identifying and training deep learning neural networks on biomedical-related datasets

• Authors : Alan E Woessner; Usman Anjum; Hadi Salman

Subjects: 0303 health sciences; 03 medical and health sciences; Deep Learning

• Source: Brief Bioinform

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Automated and reproducible cell identification in mass cytometry using neural networks.

• Authors : Saihi H; Centre for Immunobiology, Blizard Institute, School of Medicine and Dentistry, Barts and the London, UK.; Bessant C

Subjects: Neural Networks, Computer* ; COVID-19*; Humans

• Source: Briefings in bioinformatics [Brief Bioinform] 2023 Sep 22; Vol. 24 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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A comprehensive review and evaluation of graph neural networks for non-coding RNA and complex disease associations.

• Authors : Hu X; School of Computer Science and Engineering, Central South University,410075 Changsha, China.; Liu D

Subjects: Neural Networks, Computer* ; RNA, Untranslated*/RNA, Untranslated*/RNA, Untranslated*/genetics; Humans

• Source: Briefings in bioinformatics [Brief Bioinform] 2023 Sep 22; Vol. 24 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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