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Academic Journal

Contamination detection in genomic data: more is not enough

Authors : Luc Cornet; Denis Baurain

Subjects: Contamination detection; Genomics; Databases

Source: Genome Biology, Vol 23, Iss 1, Pp 1-15 (2022)

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Academic Journal

Canonical mRNA is the exception, rather than the rule

Authors : Jun-An Chen; Simon Conn

Subjects: Non-coding RNA; Review; Circular RNA

Source: Genome Biology, Vol 18, Iss 1, Pp 1-4 (2017)

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An accessible, efficient and global approach for the large-scale sequencing of bacterial genomes

Authors : Jay C. D. Hinton; Ross Low; Blanca M. Perez-Sepulveda

Subjects: DNA, Bacterial; Thermolysates; QH301-705.5

Source: Genome Biology, Vol 22, Iss 1, Pp 1-18 (2021)GENOME BIOLOGYThe 10KSG consortium 2021, ' An accessible, efficient and global

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Simplitigs as an efficient and scalable representation of de Bruijn graphs

Authors : Michael H. Baym; Karel Břinda; Gregory Kucherov ...

Subjects: Simplitigs; Theoretical computer science; lcsh:QH426-470

Source: Genome Biology, Vol 22, Iss 1, Pp 1-24 (2021)Genome BiologyGenome Biology, BioMed Central,

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Comprehensive integrative profiling of upper tract urothelial carcinomas

Authors : Nizar N. Tannir; Hui Yao; Morgan Rouprêt ...

Subjects: Epigenomics; Tumor suppressor gene; lcsh:QH426-470

Source: Genome Biology, Vol 22, Iss 1, Pp 1-25 (2021)Genome BiologyGenome Biology, BioMed Central,

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sPLINK: a hybrid federated tool as a robust alternative to meta-analysis in genome-wide association studies

Authors : Reza Nasirigerdeh; Reihaneh Torkzadehmahani; Julian Matschinske ...

Subjects: 0303 health sciences; QH301-705.5; 1184 Genetics, developmental biology, physiology

Source: Genome Biology, Vol 23, Iss 1, Pp 1-24 (2022)Genome BiologyNasirigerdeh, R, Torkzadehmahani, R, Matschinske, J, Frisch, T,

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Navigating the crowd: visualizing coordination between genome dynamics, structure, and transcription

Authors : Kerstin Bystricky; Haitham A. Shaban; Roman Barth

Subjects: chromosome dynamics; rna-polymerase-ii; Quantitative imaging

Source: Genome Biology, Vol 21, Iss 1, Pp 1-18 (2020)Genome Biology (Online), 21(1)Genome Biology

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Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

Authors : Bohu Pan; Luyao Ren; Vitor Onuchic ...

Subjects: 11832 Microbiology and virology; 0303 health sciences; 318 Medical biotechnology

Source: Genome BiologyGenome Biology, Vol 23, Iss 1, Pp 1-26 (2022)

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IRFinder-S: a comprehensive suite to discover and explore intron retention

Authors : Reini F. Luco; Andrew J. Oldfield; Claudio Lorenzi ...

Subjects: Splicing efficiency; QH301-705.5; QH426-470

Source: Genome BiologyGenome Biology, BioMed Central, 2021, 22 (1), ⟨10.1186/s13059-021-02515-8⟩Genome

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An explainable artificial intelligence approach for decoding the enhancer histone modifications code and identification of novel enhancers in Drosophila

Authors : Jareth C Wolfe; Hani Hagras; Liudmila A Mikheeva

Subjects: Explainable Artificial Intelligence; QH301-705.5; In silico

Source: Genome BiologyGenome Biology, Vol 22, Iss 1, Pp 1-23 (2021)

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