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Academic Journal

SspA is a transcriptional regulator of CRISPR adaptation in E. coli.

  • Authors : Lopez SC; Gladstone Institute of Data Science and Biotechnology, 1650 Owens St, San Francisco, CA 94158, USA.; Graduate Program in Bioengineering, University of California, San Francisco and Berkeley, 1700 Fourth St, San Francisco, CA 94158, USA.

Subjects: Escherichia coli*/Escherichia coli*/Escherichia coli*/genetics ; Escherichia coli Proteins*/Escherichia coli Proteins*/Escherichia coli Proteins*/genetics ; Escherichia coli Proteins*/Escherichia coli Proteins*/Escherichia coli Proteins*/metabolism

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Feb 08; Vol. 53 (4).Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

A systematic survey of TF function in E. coli suggests RNAP stabilization is a prevalent strategy for both repressors and activators.

  • Authors : Guharajan S; Department of Systems Biology, University of Massachusetts Chan Medical School, Worcester, MA 01605, United States.; Division of Gastroenterology, Hepatology and Nutrition, Boston Children's Hospital, Boston, MA 02115, United States.

Subjects: DNA-Directed RNA Polymerases*/DNA-Directed RNA Polymerases*/DNA-Directed RNA Polymerases*/metabolism ; DNA-Directed RNA Polymerases*/DNA-Directed RNA Polymerases*/DNA-Directed RNA Polymerases*/genetics ; Escherichia coli*/Escherichia coli*/Escherichia coli*/genetics

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Feb 08; Vol. 53 (4).Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Disassembly of unstable RNA structures by an E. coli DEAD-box chaperone accelerates ribosome assembly.

  • Authors : Sun Y; T.C. Jenkins Department of Biophysics, Johns Hopkins University, 3400 N. Charles St., Baltimore, MD 21218, United States.; Woodson SA

Subjects: Escherichia coli Proteins*/Escherichia coli Proteins*/Escherichia coli Proteins*/metabolism ; Escherichia coli Proteins*/Escherichia coli Proteins*/Escherichia coli Proteins*/genetics ; Escherichia coli*/Escherichia coli*/Escherichia coli*/genetics

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Feb 08; Vol. 53 (4).Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Transcriptome-scale analysis uncovers conserved residues in the hydrophobic core of the bacterial RNA chaperone Hfq required for small regulatory RNA stability.

  • Authors : McQuail J; Centre for Bacterial Resistance Biology, Imperial College London, LondonSW7 2AZ, United Kingdom.; Krepl M

Subjects: Host Factor 1 Protein*/Host Factor 1 Protein*/Host Factor 1 Protein*/metabolism ; Host Factor 1 Protein*/Host Factor 1 Protein*/Host Factor 1 Protein*/genetics ; Host Factor 1 Protein*/Host Factor 1 Protein*/Host Factor 1 Protein*/chemistry

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 24; Vol. 53 (3).Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

The membrane-targeting-sequence motif is required for exhibition of recessive resurrection in Escherichia coli RNase E.

  • Authors : Basak P; Indian Institute of Science Education and Research Mohali, Sector 81, SAS Nagar 140306 Punjab, India.; Ekka M

Subjects: Escherichia coli*/Escherichia coli*/Escherichia coli*/genetics ; Endoribonucleases*/Endoribonucleases*/Endoribonucleases*/metabolism ; Endoribonucleases*/Endoribonucleases*/Endoribonucleases*/genetics

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 24; Vol. 53 (3).Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Genome-wide mapping of spontaneous DNA replication error-hotspots using mismatch repair proteins in rapidly proliferating Escherichia coli.

  • Authors : Hasenauer FC; Université Paris Cité, CNRS, Inserm, Institut Cochin, F-75014 Paris, France.; Barreto HC

Subjects: DNA Replication*/DNA Replication*/DNA Replication*/genetics ; Escherichia coli*/Escherichia coli*/Escherichia coli*/genetics ; Escherichia coli*/Escherichia coli*/Escherichia coli*/metabolism

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 11; Vol. 53 (2).Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Negative DNA supercoiling enhances DARS2 binding of DNA-bending protein IHF in the activation of Fis-dependent ATP-DnaA production.

  • Authors : Kasho K; Department of Molecular Biology, Graduate School of Pharmaceutical Sciences, Kyushu University, Fukuoka 812-8582, Japan.; Miyoshi K

Subjects: DNA, Superhelical*/DNA, Superhelical*/DNA, Superhelical*/metabolism ; DNA, Superhelical*/DNA, Superhelical*/DNA, Superhelical*/chemistry ; Adenosine Triphosphate*/Adenosine Triphosphate*/Adenosine Triphosphate*/metabolism

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 11; Vol. 53 (2).Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Molecular mechanisms underlying allosteric behavior of Escherichia coli DgoR, a GntR/FadR family transcriptional regulator.

  • Authors : Singh S; Department of Biological Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, SAS Nagar, Mohali 140306, Punjab, India.; Arya G

Subjects: Escherichia coli Proteins*/Escherichia coli Proteins*/Escherichia coli Proteins*/metabolism ; Escherichia coli Proteins*/Escherichia coli Proteins*/Escherichia coli Proteins*/genetics ; Escherichia coli Proteins*/Escherichia coli Proteins*/Escherichia coli Proteins*/chemistry

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 07; Vol. 53 (1).Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Mechanism of activation of contact-dependent growth inhibition tRNase toxin by the amino acid biogenesis factor CysK in the bacterial competition system.

  • Authors : Feng Z; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-8562, Japan.; Yashiro Y

Subjects: RNA, Transfer*/RNA, Transfer*/RNA, Transfer*/metabolism ; Escherichia coli Proteins*/Escherichia coli Proteins*/Escherichia coli Proteins*/metabolism ; Escherichia coli Proteins*/Escherichia coli Proteins*/Escherichia coli Proteins*/genetics

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 07; Vol. 53 (1).Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Control of iron acquisition by multiple small RNAs unravels a new role for transcriptional terminator loops in gene regulation.

  • Authors : Solchaga Flores E; Expression Génétique Microbienne, UMR8261 CNRS, Université Paris Cité, Institut de Biologie Physico-Chimique, 75005 Paris, France.; Jagodnik J

Subjects: Gene Expression Regulation, Bacterial* ; Iron*/Iron*/Iron*/metabolism ; Escherichia coli Proteins*/Escherichia coli Proteins*/Escherichia coli Proteins*/metabolism

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Dec 11; Vol. 52 (22), pp. 13775-13791.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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  • 1-10 of  2,033 results for ""ESCHERICHIA coli proteins""