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Novel conserved domains in proteins with predicted roles in eukaryotic cell-cycle regulation, decapping and RNA stability

Authors : L. Aravind; Vivek Anantharaman

Subjects: Models, Molecular; RNA Caps; Protein Folding

Source: BMC Genomics, Vol 5, Iss 1, p 45 (2004)BMC Genomics

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The complexity of selection at the major primate β-defensin locus

Authors : Philippe Gautier; Colin A. Semple; Perdita E. Barran

Subjects: Models, Molecular; Primates; Time Factors

Source: BMC Evolutionary Biology, Vol 5, Iss 1, p 32 (2005)BMC Evolutionary BiologySemple, C A M, Maxwell, A, Gautier, P, Kilanowski,

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Quantitative analysis of EGR proteins binding to DNA: assessing additivity in both the binding site and the protein

Authors : Gary D. Stormo; Jiajian Liu

Subjects: Models, Molecular; Binding energy; Context (language use)

Source: BMC Bioinformatics, Vol 6, Iss 1, p 176 (2005)BMC Bioinformatics

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The PD-(D/E)XK superfamily revisited: identification of new members among proteins involved in DNA metabolism and functional predictions for domains of (hitherto) unknown function

Authors : Jan Kosinski; Janusz M. Bujnicki; Marcin Feder

Subjects: Models, Molecular; Protein family; Amino Acid Motifs

Source: BMC Bioinformatics, Vol 6, Iss 1, p 172 (2005)BMC Bioinformatics

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A comparison of RNA folding measures

Authors : Vincent Moulton; Paul P. Gardner; Eva Freyhult

Subjects: Models, Molecular; Genetics; Protein Folding

Source: BMC Bioinformatics, Vol 6, Iss 1, p 241 (2005)BMC Bioinformatics

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In silico characterization of the family of PARP-like poly(ADP-ribosyl)transferases (pARTs)

Authors : Helge Otto; Katharina Dittmar; Friedrich Haag

Subjects: Models, Molecular; Protein Conformation; Ribose

Source: BMC Genomics, Vol 6, Iss 1, p 139 (2005)E-Prints Complutense. Archivo Institucional de la UCMinstnameE-Prints Complutense: Archivo Institucional de la

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Linking enzyme sequence to function using conserved property difference locator to identify and annotate positions likely to control specific functionality

Authors : Sean R. McCorkle; Kimberly M. Mayer; John Shanklin

Subjects: Models, Molecular; Sequence analysis; Molecular Sequence Data

Source: BMC Bioinformatics, Vol 6, Iss 1, p 284 (2005)BMC Bioinformatics

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The bone morphogenetic protein antagonist gremlin 1 is overexpressed in human cancers and interacts with YWHAH protein

Authors : Seung Min Shin; Jin Woo Kim; Seon-Ah Ha

Subjects: Models, Molecular; Cancer Research; Blotting, Western

Source: BMC Cancer, Vol 6, Iss 1, p 74 (2006)BMC Cancer

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Predicting DNA-binding sites of proteins from amino acid sequence

Authors : Vasant Honavar; Feihong Wu; Drena Dobbs

Subjects: Models, Molecular; Entropy; Computational biology

Source: BMC Bioinformatics, Vol 7, Iss 1, p 262 (2006)BMC Bioinformatics

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Use of molecular modeling and site-directed mutagenesis to define the structural basis for the immune response to carbohydrate xenoantigens

Authors : Alan Xu; Robert Mencel; Natasha S. Barteneva

Subjects: Models, Molecular; lcsh:Immunologic diseases. Allergy; Swine

Source: BMC Immunology, Vol 8, Iss 1, p 3 (2007)BMC Immunology

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