Source: NPJ systems biology and applications [NPJ Syst Biol Appl] 2024 Apr 05; Vol. 10 (1), pp. 36. Date of Electronic Publication: 2024 Apr 05.Publisher: Nature Publishing Group in partnership with SBI, The Systems Biology Institute Country of Publication: England NLM ID: 101677786 Publication Model:

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Gene expression profiles in COVID-19-associated tracheal stenosis indicate persistent anti-viral response and dysregulated retinol metabolism.

Authors : Martins RS; Department of Surgery, Hackensack Meridian School of Medicine, Hackensack Meridian Health (HMH) Network, 08820, Edison, NJ, USA. .; Division of Thoracic Surgery, Department of Surgery, Hackensack Meridian School of Medicine, Hackensack Meridian Health (HMH) Network- Central Region, 65 James Street, 08820, Edison, NJ, USA. .

Subjects: COVID-19*/COVID-19*/COVID-19*/genetics ; COVID-19*/COVID-19*/COVID-19*/metabolism ; COVID-19*/COVID-19*/COVID-19*/virology

Source: BMC research notes [BMC Res Notes] 2024 May 16; Vol. 17 (1), pp. 140. Date of Electronic Publication: 2024 May 16.Publisher: Biomed Central Country of Publication: England NLM ID: 101462768 Publication Model: Electronic Cited Medium: Internet ISSN: 1756-0500

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Bioinformatics and system biology approaches to determine the connection of SARS-CoV-2 infection and intrahepatic cholangiocarcinoma.

Authors : Zhou X; Division of Liver Surgery, Department of General Surgery and Laboratory of Liver Surgery, and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, China.; Huang T

Subjects: Cholangiocarcinoma*/Cholangiocarcinoma*/Cholangiocarcinoma*/genetics ; Cholangiocarcinoma*/Cholangiocarcinoma*/Cholangiocarcinoma*/virology ; COVID-19*/COVID-19*/COVID-19*/genetics

Source: PloS one [PLoS One] 2024 Apr 22; Vol. 19 (4), pp. e0300441. Date of Electronic Publication: 2024 Apr 22 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Comparative study on differential expression analysis methods for single-cell RNA sequencing data with small biological replicates: Based on single-cell transcriptional data of PBMCs from COVID-19 severe patients.

Authors : Xue J; Department of Statistics, School of Economics, Hangzhou Dianzi University, Hangzhou, China.; Zhou X

Subjects: Software* ; COVID-19*/COVID-19*/COVID-19*/genetics; Humans

Source: PloS one [PLoS One] 2024 Mar 27; Vol. 19 (3), pp. e0299358. Date of Electronic Publication: 2024 Mar 27 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Bioinformatics Insights on Viral Gene Expression Transactivation: From HIV-1 to SARS-CoV-2.

Authors : Patarca R; ACCESS Health International, 384 West Lane, Ridgefield, CT 06877, USA.; Feinstein Institutes for Medical Research, 350 Community Dr, Manhasset, NY 11030, USA.

Subjects: HIV-1*/HIV-1*/HIV-1*/physiology ; COVID-19*/COVID-19*/COVID-19*/genetics; Humans

Source: International journal of molecular sciences [Int J Mol Sci] 2024 Mar 16; Vol. 25 (6). Date of Electronic Publication: 2024 Mar 16.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Integration of human organoids single-cell transcriptomic profiles and human genetics repurposes critical cell type-specific drug targets for severe COVID-19.

Authors : Ma Y; National Engineering Research Center of Ophthalmology and Optometry, Eye Hospital, Wenzhou Medical University, Wenzhou, China.; Department of Biomedical Informatics, Institute of Biomedical Big Data, Wenzhou Medical University, Wenzhou, China.

Subjects: Genome-Wide Association Study* ; COVID-19*/COVID-19*/COVID-19*/genetics; Humans

Source: Cell proliferation [Cell Prolif] 2024 Mar; Vol. 57 (3), pp. e13558. Date of Electronic Publication: 2023 Oct 08.Publisher: Published for the Cell Kinetics Society, the European Study Group for Cell Proliferation, and the International Cell Cycle Society by Blackwell Scientific Publications

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Recognition of Differentially Expressed Molecular Signatures and Pathways Associated with COVID-19 Poor Prognosis in Glioblastoma Patients.

Authors : Alzahrani FA; Department of Biochemistry, Faculty of Science, Embryonic Stem Cell Unit, King Fahad Center for Medical Research, King Abdulaziz University, Jeddah 21589, Saudi Arabia.; Khan MF

Subjects: COVID-19*/COVID-19*/COVID-19*/diagnosis ; COVID-19*/COVID-19*/COVID-19*/genetics ; Gene Expression Profiling*

Source: International journal of molecular sciences [Int J Mol Sci] 2023 Feb 10; Vol. 24 (4). Date of Electronic Publication: 2023 Feb 10.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Environmental pathways affecting gene expression (E.PAGE) as an R package to predict gene-environment associations.

Authors : Muralidharan S; The University of Queensland Diamantina Institute, Translational Research Institute, The University of Queensland, 37 Kent St, Woolloongabba, QLD, 4102, Australia.; Ali S

Subjects: Gene Expression Profiling* ; COVID-19*; Humans

Source: Scientific reports [Sci Rep] 2022 Nov 04; Vol. 12 (1), pp. 18710. Date of Electronic Publication: 2022 Nov 04.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Global Transcriptomic Analysis of Placentas from Women with Gestational SARS-CoV-2 Infection during the Third Trimester of Pregnancy.

Authors : Tang Y; WHO Collaborating Centre, Division of Neonatology, Obstetrics and Gynecology, Department of Women's and Children's Health, Karolinska University Hospital, Karolinska Institutet, SE 17176 Stockholm, Sweden.; Department of Obstetrics and Gynecology, PEDEGO Research Unit, Medical Research Centre, Oulu University Hospital, University of Oulu, 90220 Oulu, Finland.

Subjects: Pre-Eclampsia* ; COVID-19*/COVID-19*/COVID-19*/genetics ; Premature Birth*

Source: International journal of molecular sciences [Int J Mol Sci] 2024 Jan 28; Vol. 25 (3). Date of Electronic Publication: 2024 Jan 28.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Gene expression profiling of host lipid metabolism in SARS-CoV-2 infected patients: a systematic review and integrated bioinformatics analysis.

Authors : Munawar WASWA; Faculty of Medicine and Health Sciences, Universiti Sains Islam Malaysia, Nilai, Malaysia.; Elias MH

Subjects: SARS-CoV-2* ; COVID-19*; Humans

Source: BMC infectious diseases [BMC Infect Dis] 2024 Jan 23; Vol. 24 (1), pp. 124. Date of Electronic Publication: 2024 Jan 23.Publisher: BioMed Central Country of Publication: England NLM ID: 100968551 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2334

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