Search Results

Single-molecule analysis reveals that IPMK enhances the DNA-binding activity of the transcription factor SRF.

• Authors : Ahn H; Department of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.; Yu J

Subjects: Serum Response Factor*/Serum Response Factor*/Serum Response Factor*/metabolism ; Serum Response Factor*/Serum Response Factor*/Serum Response Factor*/genetics ; DNA*/DNA*/DNA*/metabolism

• Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 07; Vol. 53 (1).Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Identification of transcription factor co-binding patterns with non-negative matrix factorization.

• Authors : Rauluseviciute I; Centre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, University of Oslo, 0318 Oslo, Norway.; Launay T

Subjects: Transcription Factors*/Transcription Factors*/Transcription Factors*/metabolism ; Protein Binding* ; DNA*/DNA*/DNA*/metabolism

• Source: Nucleic acids research [Nucleic Acids Res] 2024 Oct 14; Vol. 52 (18), pp. e85.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Deep mutational scanning quantifies DNA binding and predicts clinical outcomes of PAX6 variants.

• Authors : McDonnell AF; MRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh, EH4 2XU, UK.; Plech M

Subjects: PAX6 Transcription Factor*/PAX6 Transcription Factor*/PAX6 Transcription Factor*/genetics ; PAX6 Transcription Factor*/PAX6 Transcription Factor*/PAX6 Transcription Factor*/metabolism ; DNA*/DNA*/DNA*/genetics

• Source: Molecular systems biology [Mol Syst Biol] 2024 Jul; Vol. 20 (7), pp. 825-844. Date of Electronic Publication: 2024 Jun 07.Publisher: EMBO Press Country of Publication: Germany NLM ID: 101235389 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Transcription factor VIB-1 activates catalase-3 expression by promoting PIC assembly in Neurospora crassa.

• Authors : Liu, Huan¹ (AUTHOR); Zhang, Qin¹ (AUTHOR); Huang, Fusheng¹ (AUTHOR)

Subjects: *RNA polymerase II; *PROTEIN overexpression; *NEUROSPORA crassa

• Source: Nucleic Acids Research. 3/24/2025, Vol. 53 Issue 5, p1-16. 16p.

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Single-molecule conformational dynamics of a transcription factor reveals a continuum of binding modes controlling association and dissociation.

• Authors : Chen W; Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, California 92093, USA.; Lu W

Subjects: Transcription, Genetic*; DNA/DNA/DNA/*genetics ; Interferons/Interferons/Interferons/*genetics

• Source: Nucleic acids research [Nucleic Acids Res] 2021 Nov 08; Vol. 49 (19), pp. 11211-11223.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Transcription factor condensates and signaling driven transcription.

• Authors : Mann R; National Centre for Biological Sciences, TIFR, Bangalore, India.; Notani D

Subjects: Transcription Factors*/Transcription Factors*/Transcription Factors*/genetics ; Transcription Factors*/Transcription Factors*/Transcription Factors*/metabolism ; DNA*/DNA*/DNA*/metabolism

• Source: Nucleus (Austin, Tex.) [Nucleus] 2023 Dec; Vol. 14 (1), pp. 2205758.Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101518322 Publication Model: Print Cited Medium: Internet ISSN:

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Light-dependent flavin redox and adduct states control the conformation and DNA-binding activity of the transcription factor EL222 Open Access.

• Authors : Chaudhari, Aditya S^1,2 (AUTHOR); Favier, Adrien³ (AUTHOR); Tehrani, Zahra Aliakbar⁴ (AUTHOR)

• Source: Nucleic Acids Research. 4/11/2025, Vol. 53 Issue 6, p1-17. 17p.

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A transcription factor from the cryptic Escherichia coli Rac prophage controls both phage and host operons.

• Authors : Wons, Ewa¹ (AUTHOR); Gucwa, Katarzyna¹ (AUTHOR); Lewandowska, Natalia¹ (AUTHOR)

Subjects: *BACTERIAL genomes; *VIRAL genomes; *BACTERIAL chromosomes

• Source: Nucleic Acids Research. 3/24/2025, Vol. 53 Issue 5, p1-21. 21p.

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Cu2+ mediates the oxidation of the transcription factor MscA to regulate the antioxidant defense of mycobacteria.

• Authors : Xiang, Yuling¹ (AUTHOR); Zheng, Jiachen¹ (AUTHOR); Liu, Zhendong¹ (AUTHOR)

Subjects: *TRANSCRIPTION factors; *REACTIVE oxygen species; *GENE clusters

• Source: Nucleic Acids Research. 1/13/2025, Vol. 53 Issue 1, p1-12. 12p.

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Asymmetric dimerization in a transcription factor superfamily is promoted by allosteric interactions with DNA.

• Authors : Patel AKM; IGBMC (Institute of Genetics and of Molecular and Cellular Biology), Centre for Integrative Biology (CBI), Illkirch, France.; Université de Strasbourg (Unistra), Strasbourg, France.

Subjects: Transcription Factors*/Transcription Factors*/Transcription Factors*/metabolism ; DNA*/DNA*/DNA*/genetics ; DNA*/DNA*/DNA*/metabolism

• Source: Nucleic acids research [Nucleic Acids Res] 2023 Sep 08; Vol. 51 (16), pp. 8864-8879.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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