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Academic Journal

Reverse Chromatin Immunoprecipitation (R-ChIP) enables investigation of the upstream regulators of plant genes.

  • Authors : Wen X; State Key Laboratory of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, 830011, China.; Turpan Eremophytes Botanical Garden, Chinese Academy of Sciences, Turpan, 838008, China.

Subjects: Gene Expression Regulation, Plant* ; Genes, Plant* ; Regulatory Sequences, Nucleic Acid*

  • Source: Communications biology [Commun Biol] 2020 Dec 14; Vol. 3 (1), pp. 770. Date of Electronic Publication: 2020 Dec 14.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Isolation of Specific Genomic Regions and Identification of Their Associated Molecules by Engineered DNA-Binding Molecule-Mediated Chromatin Immunoprecipitation (enChIP) Using the CRISPR System and TAL Proteins.

  • Authors : Fujii H; Chromatin Biochemistry Research Group, Combined Program on Microbiology and Immunology, Research Institute for Microbial Diseases, Osaka University, Yamadaoka 3-1, Suita City, Osaka 565-0871, Japan. .; Fujita T

Subjects: Chromatin Immunoprecipitation*/Chromatin Immunoprecipitation*/Chromatin Immunoprecipitation*/methods ; Clustered Regularly Interspaced Short Palindromic Repeats* ; Genetic Association Studies*/Genetic Association Studies*/Genetic Association Studies*/methods

  • Source: International journal of molecular sciences [Int J Mol Sci] 2015 Sep 09; Vol. 16 (9), pp. 21802-12. Date of Electronic Publication: 2015 Sep 09.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

proChIPdb: a chromatin immunoprecipitation database for prokaryotic organisms.

Subjects: *IMMUNOPRECIPITATION; *DNA-binding proteins; *GENE regulatory networks

  • Source: Nucleic Acids Research. 1/7/2022, Vol. 50 Issue D1, pD1077-D1084. 8p.

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Academic Journal

Chromatin immunoprecipitation identifies genes under direct VraSR regulation in Staphylococcus aureus.

  • Authors : Sengupta M; School of Biological Sciences, Illinois State University, Normal, IL 61790-4120, USA.; Jain V

Subjects: Chromatin Immunoprecipitation*; Bacterial Proteins/Bacterial Proteins/Bacterial Proteins/*genetics ; DNA-Binding Proteins/DNA-Binding Proteins/DNA-Binding Proteins/*genetics

  • Source: Canadian journal of microbiology [Can J Microbiol] 2012 Jun; Vol. 58 (6), pp. 703-8. Date of Electronic Publication: 2012 May 09.Publisher: Canadian Science Publishing Country of Publication: Canada NLM ID: 0372707 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

Current Analytical Strategies in Studying Chromatin-Associated-Proteome (Chromatome).

  • Authors : Khan N; Institute for Clinical Chemistry/UMG-Laboratories, University Medical Centre, Robert-Koch-Str. 40, 37075 Goettingen, Germany.; Department of Biotechnology & Genetic Engineering, Kohat University of Science and Technology, Kohat 26000, Khyber Pakhtunkhwa, Pakistan.

Subjects: Proteome*; Chromatin/Chromatin/Chromatin/*metabolism ; DNA-Binding Proteins/DNA-Binding Proteins/DNA-Binding Proteins/*metabolism

  • Source: Molecules (Basel, Switzerland) [Molecules] 2021 Nov 05; Vol. 26 (21). Date of Electronic Publication: 2021 Nov 05.Publisher: MDPI Country of Publication: Switzerland NLM ID: 100964009 Publication Model: Electronic Cited Medium: Internet ISSN: 1420-3049

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Academic Journal

A novel convolution attention model for predicting transcription factor binding sites by combination of sequence and shape.

  • Authors : Zhang Y; School of Computer Science, Chengdu University of Information Technology, 610225, Chengdu, China.; School of Computer Science and Engineering, University of Electronic Science and Technology of China, 611731, Chengdu, China.

Subjects: Binding Sites*; Computational Biology/Computational Biology/Computational Biology/*methods ; DNA-Binding Proteins/DNA-Binding Proteins/DNA-Binding Proteins/*chemistry

  • Source: Briefings in bioinformatics [Brief Bioinform] 2022 Jan 17; Vol. 23 (1).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

ReMap 2018: an updated atlas of regulatory regions from an integrative analysis of DNA-binding ChIP-seq experiments.

  • Authors : Chèneby J; INSERM, UMR1090 TAGC, Marseille F-13288, France.; Aix-Marseille Université, UMR1090 TAGC, Marseille F-13288, France.

Subjects: Chromatin Immunoprecipitation* ; Databases, Genetic* ; Regulatory Elements, Transcriptional*

  • Source: Nucleic acids research [Nucleic Acids Res] 2018 Jan 04; Vol. 46 (D1), pp. D267-D275.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Identification of telomere-associated molecules by engineered DNA-binding molecule-mediated chromatin immunoprecipitation (enChIP).

  • Authors : Fujita T; Combined Program on Microbiology and Immunology, Research Institute for Microbial Diseases, Osaka University, 3-1 Yamadaoka, Suita, 565-0871 Osaka, Japan.; Asano Y

Subjects: Chromatin Immunoprecipitation/Chromatin Immunoprecipitation/Chromatin Immunoprecipitation/*methods ; DNA-Binding Proteins/DNA-Binding Proteins/DNA-Binding Proteins/*metabolism ; Telomere/Telomere/Telomere/*metabolism

  • Source: Scientific reports [Sci Rep] 2013 Nov 08; Vol. 3, pp. 3171. Date of Electronic Publication: 2013 Nov 08.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Accounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data.

  • Authors : Bao Y; School of Information Systems, Computing and Mathematics, Brunel University, London, UK.; Vinciotti V

Subjects: Models, Statistical*; Chromatin Immunoprecipitation/Chromatin Immunoprecipitation/Chromatin Immunoprecipitation/*methods ; DNA-Binding Proteins/DNA-Binding Proteins/DNA-Binding Proteins/*analysis

  • Source: BMC bioinformatics [BMC Bioinformatics] 2013 May 30; Vol. 14, pp. 169. Date of Electronic Publication: 2013 May 30.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Target gene analysis by microarrays and chromatin immunoprecipitation identifies HEY proteins as highly redundant bHLH repressors.

  • Authors : Heisig J; Developmental Biochemistry, Theodor-Boveri-Institute, Biocenter, University of Wuerzburg, Wuerzburg, Germany.; Weber D

Subjects: Basic Helix-Loop-Helix Transcription Factors*/Basic Helix-Loop-Helix Transcription Factors*/Basic Helix-Loop-Helix Transcription Factors*/genetics ; Basic Helix-Loop-Helix Transcription Factors*/Basic Helix-Loop-Helix Transcription Factors*/Basic Helix-Loop-Helix Transcription Factors*/metabolism ; Cell Cycle Proteins*/Cell Cycle Proteins*/Cell Cycle Proteins*/genetics

  • Source: PLoS genetics [PLoS Genet] 2012; Vol. 8 (5), pp. e1002728. Date of Electronic Publication: 2012 May 17.Publisher: Public Library of Science Country of Publication: United States NLM ID: 101239074 Publication Model: Print-Electronic Cited Medium: Internet

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  • 1-10 of  7,417 results for ""Immunoprecipitation""