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Effects of error, chimera, bias, and GC content on the accuracy of amplicon sequencing

• Authors : Qin, Yujia; Wu, Liyou; Zhang, Qiuting

Subjects: Microbiology; Biological Sciences; Genetics

• Source: mSystems. 8(6)

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Best Practices in Designing, Sequencing, and Identifying Random DNA Barcodes

• Authors : Johnson, Milo S; Venkataram, Sandeep; Kryazhimskiy, Sergey

Subjects: Biological Sciences; Bioinformatics and Computational Biology; Genetics

• Source: Journal of Molecular Evolution. 91(3)

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Highly-multiplexed and efficient long-amplicon PacBio and Nanopore sequencing of hundreds of full mitochondrial genomes.

• Authors : Karin, Benjamin R; Arellano, Selene; Wang, Laura

Subjects: Sequence Analysis; DNA; Biodiversity

• Source: BMC genomics. 24(1)

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PARSID: a Python script for automatic analysis of local BLAST results for a rapid molecular taxonomic identification

• Authors : Costanza Piccoli; Antonio Muñoz-Mérida; Angelica Crottini

Subjects: Blastn; DNA-barcoding; Molecular taxonomy

• Source: BMC Research Notes, Vol 17, Iss 1, Pp 1-5 (2024)

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Identification and reproductive isolation of Euborellia species (Insecta, Dermaptera, Anisolabididae) from East and Southeast Asia

• Authors : Kamimura, Yoshitaka; Lee, Chow-Yang; Yamasako, Junsuke

Subjects: Biological Sciences; Ecology; Evolutionary Biology

• Source: ZooKeys. 1146(1146)

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Comparative and phylogenetic analysis of Chiloschista (Orchidaceae) species and DNA barcoding investigation based on plastid genomes

• Authors : Ding-Kun Liu; Cheng-Yuan Zhou; Xiong-De Tu

Subjects: Aeridinae; Chloroplast genome; DNA barcoding

• Source: BMC Genomics, Vol 24, Iss 1, Pp 1-15 (2023)

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Single-Cell Protein Profiling by Microdroplet Barcoding and Next-Generation Sequencing

• Authors : Kim, Samuel C; Haliburton, John R; Gartner, Zev J

Subjects: Biochemistry and Cell Biology; Bioinformatics and Computational Biology; Genetics

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taxalogue: a toolkit to create comprehensive CO1 reference databases

• Authors : Niklas W. Noll; Christoph Scherber; Livia Schäffler

Subjects: CO1; DNA Barcoding; Metabarcoding

• Source: PeerJ, Vol 11, p e16253 (2023)

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Persistence and plasticity in bacterial gene regulation

• Authors : Baumgart, Leo A; Lee, Ji Eun; Salamov, Asaf

Subjects: Biochemistry and Cell Biology; Bioinformatics and Computational Biology; Genetics

• Source: Nature Methods. 18(12)

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Species identification of spider mites (Tetranychidae: Tetranychinae): a review of methods

• Authors : A. V. Razuvaeva; E. G. Ulyanova; E. S. Skolotneva

Subjects: spider mites; species identification; allozyme analysis

• Source: Вавиловский журнал генетики и селекции, Vol 27, Iss 3, Pp 240-249 (2023)

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