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Academic Journal

Fast and accurate imputation of genotypes from noisy low-coverage sequencing data in bi-parental populations.

  • Authors : Triay C; DIADE, IRD, Cirad, University of Montpellier, Montpellier, France.; Boizet A

Subjects: High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/methods ; Genotype*; Algorithms

  • Source: PloS one [PLoS One] 2025 Jan 30; Vol. 20 (1), pp. e0314759. Date of Electronic Publication: 2025 Jan 30 (Print Publication: 2025).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Tracking the emergence of a novel genotype of Decapod hepanhamaparvovirus in shrimp using laser microdissection and next generation sequencing.

  • Authors : Cruz-Flores R; Aquaculture Pathology Laboratory, School of Animal and Comparative Biomedical Sciences, The University of Arizona, Tucson, Arizona, United States of America.; Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Ensenada, Baja California, México.

Subjects: High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/methods ; Phylogeny* ; Genotype*

  • Source: PloS one [PLoS One] 2024 Oct 10; Vol. 19 (10), pp. e0311592. Date of Electronic Publication: 2024 Oct 10 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Highly replicated experiments studying complex genotypes using nested DNA barcodes.

  • Authors : Monge M; Center for Genomics and Data Science Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.; Giovanetti SM

Subjects: Genotype* ; DNA Barcoding, Taxonomic*/DNA Barcoding, Taxonomic*/DNA Barcoding, Taxonomic*/methods; Humans

  • Source: G3 (Bethesda, Md.) [G3 (Bethesda)] 2025 Sep 03; Vol. 15 (9).Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Next-Generation Sequencing Reveals a High Frequency of HIV-1 Minority Variants and an Expanded Drug Resistance Profile among Individuals on First-Line ART.

  • Authors : Nannyonjo M; Medical Research Council/Uganda Virus Research Institute & London School of Hygiene and Tropical Medicine, Uganda Research Unit, Entebbe P.O. Box 49, Uganda.; Omooja J

Subjects: HIV-1*/HIV-1*/HIV-1*/genetics ; HIV-1*/HIV-1*/HIV-1*/drug effects ; Drug Resistance, Viral*/Drug Resistance, Viral*/Drug Resistance, Viral*/genetics

  • Source: Viruses [Viruses] 2024 Sep 13; Vol. 16 (9). Date of Electronic Publication: 2024 Sep 13.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101509722 Publication Model: Electronic Cited Medium: Internet ISSN: 1999-4915

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Academic Journal

The Validation of Whole β-Globin Gene Sequencing for Detecting β-Thalassemia Mutations Found in Thailand Using Next-Generation Sequencing (NGS).

  • Authors : Karnpean R; Department of Pathology, Maha Chakri Sirindhorn Medical Center, Faculty of Medicine, Srinakharinwirot University, Nakhon Nayok, Thailand.; Clinical Research Center, Faculty of Medicine, Srinakharinwirot University, Nakhon Nayok, Thailand.

Subjects: beta-Thalassemia*/beta-Thalassemia*/beta-Thalassemia*/genetics ; beta-Thalassemia*/beta-Thalassemia*/beta-Thalassemia*/diagnosis ; High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/methods

  • Source: Hemoglobin [Hemoglobin] 2024 Sep; Vol. 48 (5), pp. 333-340. Date of Electronic Publication: 2024 Nov 13.Publisher: Informa Healthcare Country of Publication: England NLM ID: 7705865 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Genotyping Hepatitis B virus by Next-Generation Sequencing: Detection of Mixed Infections and Analysis of Sequence Conservation.

  • Authors : Dopico E; Department of Microbiology, Metropolitana Sud Territorial Clinical Laboratory, Bellvitge University Hospital, Institut Català de la Salut (ICS), 08907 Hospitalet de Llobregat, Spain.; Bellvitge Biomedical Research Institute (IDIBELL), 08908 Hospitalet de Llobregat, Spain.

Subjects: Hepatitis B virus*/Hepatitis B virus*/Hepatitis B virus*/genetics ; High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/methods ; Genotype*

  • Source: International journal of molecular sciences [Int J Mol Sci] 2024 May 17; Vol. 25 (10). Date of Electronic Publication: 2024 May 17.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

An Amplicon-Based Application for the Whole-Genome Sequencing of GI-19 Lineage Infectious Bronchitis Virus Directly from Clinical Samples.

  • Authors : Le HD; Avian Disease Division, Animal and Plant Quarantine Agency, Gimcheon 39660, Gyeongsangbuk-do, Republic of Korea.; Institute of Biotechnology, Vietnam Academy of Science and Technology, Cau Giay, Hanoi 11300, Vietnam.

Subjects: Infectious bronchitis virus*/Infectious bronchitis virus*/Infectious bronchitis virus*/genetics ; Infectious bronchitis virus*/Infectious bronchitis virus*/Infectious bronchitis virus*/isolation & purification ; Infectious bronchitis virus*/Infectious bronchitis virus*/Infectious bronchitis virus*/classification

  • Source: Viruses [Viruses] 2024 Mar 27; Vol. 16 (4). Date of Electronic Publication: 2024 Mar 27.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101509722 Publication Model: Electronic Cited Medium: Internet ISSN: 1999-4915

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Academic Journal

An Oxford Nanopore Technology-Based Hepatitis B Virus Sequencing Protocol Suitable for Genomic Surveillance Within Clinical Diagnostic Settings.

  • Authors : Tshiabuila D; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch 7600, South Africa.; Choga W

Subjects: Hepatitis B virus*/Hepatitis B virus*/Hepatitis B virus*/genetics ; Genome, Viral* ; Genotype*

  • Source: International journal of molecular sciences [Int J Mol Sci] 2024 Oct 31; Vol. 25 (21). Date of Electronic Publication: 2024 Oct 31.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

An amplicon panel for high-throughput and low-cost genotyping of Pacific oyster.

  • Authors : Sutherland BJG; Sutherland Bioinformatics, Lantzville, BC V0R 2H0, Canada.; Faculty of Science and Technology, Vancouver Island University, Nanaimo, BC V9R 5S5, Canada.

Subjects: Polymorphism, Single Nucleotide* ; Genotyping Techniques*/Genotyping Techniques*/Genotyping Techniques*/methods ; Genotype*

  • Source: G3 (Bethesda, Md.) [G3 (Bethesda)] 2024 Sep 04; Vol. 14 (9).Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Accurate genotype imputation from low-coverage whole-genome sequencing data of rainbow trout.

  • Authors : Liu S; United States Department of Agriculture, National Center for Cool and Cold Water Aquaculture, Agricultural Research Service, Kearneysville, WV 25430, USA.; Martin KE

Subjects: Oncorhynchus mykiss*/Oncorhynchus mykiss*/Oncorhynchus mykiss*/genetics ; Polymorphism, Single Nucleotide* ; Whole Genome Sequencing*/Whole Genome Sequencing*/Whole Genome Sequencing*/methods

  • Source: G3 (Bethesda, Md.) [G3 (Bethesda)] 2024 Sep 04; Vol. 14 (9).Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Print Cited Medium: Internet ISSN:

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  • 1-10 of  1,581 results for ""High-Throughput Nucleotide Sequencing""