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Academic Journal

Benchmarking uncertainty quantification for protein engineering.

  • Authors : Greenman KP; Department of Chemical Engineering, Catholic Institute of Technology, Cambridge, Massachusetts, United States of America.; Department of Chemistry, Catholic Institute of Technology, Cambridge, Massachusetts, United States of America.

Subjects: Benchmarking*/Benchmarking*/Benchmarking*/methods ; Protein Engineering*/Protein Engineering*/Protein Engineering*/methods ; Computational Biology*/Computational Biology*/Computational Biology*/methods

  • Source: PLoS computational biology [PLoS Comput Biol] 2025 Jan 07; Vol. 21 (1), pp. e1012639. Date of Electronic Publication: 2025 Jan 07 (Print Publication: 2025).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922

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Academic Journal

A percolation theory analysis of continuous functional paths in protein sequence space affirms previous insights on the optimization of proteins for adaptability.

  • Authors : Miller BJ; Biologic Institute, Redmond, WA, United States of America.

Subjects: Proteins*/Proteins*/Proteins*/genetics ; Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/metabolism

  • Source: PloS one [PLoS One] 2024 Dec 05; Vol. 19 (12), pp. e0314929. Date of Electronic Publication: 2024 Dec 05 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081

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Academic Journal

Systematic analysis of the relationship between fold-dependent flexibility and artificial intelligence protein structure prediction.

  • Authors : Haque N; Computational Structural Genomics Unit, Linda T. and John A. Mellowes Center for Genomic Sciences and Precision Medicine, Medical College of Wisconsin, Milwaukee, WI, United States of America.; Wagenknecht JB

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Protein Folding* ; Protein Conformation*

  • Source: PloS one [PLoS One] 2024 Nov 26; Vol. 19 (11), pp. e0313308. Date of Electronic Publication: 2024 Nov 26 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081

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Academic Journal

Protein stability prediction by fine-tuning a protein language model on a mega-scale dataset.

  • Authors : Chu SKS; Biophysics Graduate Program, University of California Davis, Davis, California, United States of America.; Narang K

Subjects: Protein Stability* ; Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/genetics

  • Source: PLoS computational biology [PLoS Comput Biol] 2024 Jul 22; Vol. 20 (7), pp. e1012248. Date of Electronic Publication: 2024 Jul 22 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922

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Academic Journal

An integrative approach to protein sequence design through multiobjective optimization.

  • Authors : Hong L; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, California, United States of America.; Kortemme T

Subjects: Algorithms* ; Computational Biology*/Computational Biology*/Computational Biology*/methods ; Proteins*/Proteins*/Proteins*/chemistry

  • Source: PLoS computational biology [PLoS Comput Biol] 2024 Jul 11; Vol. 20 (7), pp. e1011953. Date of Electronic Publication: 2024 Jul 11 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922

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Academic Journal

Genetic code robustness and protein evolvability are correlated and protein-specific.

  • Authors : Metzger BPH; Department of Biological Sciences, Purdue University, West Lafayette, Indiana, United States of America.

Subjects: Genetic Code* ; Evolution, Molecular* ; Proteins*/Proteins*/Proteins*/genetics

  • Source: PLoS biology [PLoS Biol] 2024 May 17; Vol. 22 (5), pp. e3002627. Date of Electronic Publication: 2024 May 17 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755

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Academic Journal

Robust genetic codes enhance protein evolvability.

  • Authors : Rozhoňová H; Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland.

Subjects: Genetic Code* ; Evolution, Molecular* ; Proteins*/Proteins*/Proteins*/genetics

  • Source: PLoS biology [PLoS Biol] 2024 May 16; Vol. 22 (5), pp. e3002594. Date of Electronic Publication: 2024 May 16 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755

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Academic Journal

Opticool: Cutting-edge transgenic optical tools.

  • Authors : Fenelon KD; Department of Biology, University of Texas at Arlington, Arlington, Texas, United States of America.; Krause J

Subjects: Proteins* ; Optogenetics*; Animals

  • Source: PLoS genetics [PLoS Genet] 2024 Mar 22; Vol. 20 (3), pp. e1011208. Date of Electronic Publication: 2024 Mar 22 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101239074

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  • 1-10 of  25,262 results for ""United States of America""