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FastBLAST: homology relationships for millions of proteins.

• Authors : Price MN; Physical Biosciences Divison, Lawrence Berkeley National Laboratory, Berkeley, California, USA. ; Dehal PS

Subjects: Sequence Homology, Amino Acid* ; Software*; Proteins/Proteins/Proteins/*chemistry

• Source: PloS one [PLoS One] 2008; Vol. 3 (10), pp. e3589. Date of Electronic Publication: 2008 Oct 31.Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: Print-Electronic Cited Medium: Internet

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Investigating homology between proteins using energetic profiles

• Authors : James O. Wrabl; Vincent J. Hilser

Subjects: Protein domain; Structural alignment; Molecular Sequence Data

• Source: PLoS Computational BiologyPLoS Computational Biology, Vol 6, Iss 3, p e1000722 (2010)

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Speeding up all-against-all protein comparisons while maintaining sensitivity by considering subsequence-level homology

• Authors : Lucas D. Wittwer; Ivana Piližota; Adrian M. Altenhoff

Subjects: All-against-all; Sequence alignment; Homology

• Source: PeerJ, Vol 2, p e607 (2014)

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Speeding up all-against-all protein comparisons while maintaining sensitivity by considering subsequence-level homology ...

• Authors : Wittwer, Lucas D.; Piližota, Ivana; Altenhoff, Adrian Michael

Subjects: All-against-all; Sequence alignment; Homology

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Speeding up all-against-all protein comparisons while maintaining sensitivity by considering subsequence-level homology.

• Authors : Wittwer, LD; Piližota, I; Altenhoff, AM

Subjects: All-against-all; Homology; Orthology

• Source: PeerJ , 2 , Article e607. (2014)

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Molecular and structural basis of drift in the functions of closely-related homologous enzyme domains: implications for function annotation based on homology searches and structural genomics

• Authors : Ambrish Roy; V. S. Gowri; Narayanaswamy Srinivasan

Subjects: Genetics; chemistry.chemical_classification; Protein Conformation

• Source: In silico biology. 9(1-2)

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FastBLAST: homology relationships for millions of proteins

• Authors : Morgan N. Price; Paramvir S. Dehal; Adam P. Arkin ...

Subjects: Protein family; Sequence analysis; General Science & Technology

• Source: PLoS ONEPloS one, vol 3, iss 10PLoS ONE, Vol 3, Iss 10, p e3589 (2008)

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Analysis of Sequence, Map Position, and Gene Expression Reveals Conserved Essential Genes for Iron Uptake in Arabidopsis and Tomato1[w]

• Authors : Bauer, Petra; Thiel, Thomas; Klatte, Marco

Subjects: Genetic Markers; Sequence Homology, Amino Acid; Iron

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Reduction of protein sequence complexity by residue grouping

• Authors : Wei Wang; Ke Fan; Jun Wang

Subjects: chemistry.chemical_classification; Residue (complex analysis); Sequence analysis

• Source: Protein engineering. 16(5)

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Identification of homology in protein structure classification

• Authors : S, Dietmann; L, Holm

Subjects: Internet; Protein Folding; Sequence Homology, Amino Acid

• Source: Nature structural biology. 8(11)

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