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Academic Journal

PhyloScape: interactive and scalable visualization platform for phylogenetic trees.

  • Authors : Wang J; Computer Network Information Center, Chinese Academy of Sciences, Beijing, 100083, China.; Zhang B

Subjects: Phylogeny* ; Software* ; Computational Biology*/Computational Biology*/Computational Biology*/methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2025 Jul 10; Vol. 26 (1), pp. 172. Date of Electronic Publication: 2025 Jul 10.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

'gitana' (phyloGenetic Imaging Tool for Adjusting Nodes and other Arrangements), a tool for plotting phylogenetic trees into ready-to-publish figures.

  • Authors : Galisteo C; Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, 41012, Sevilla, Spain.; Department of Animal Health, Faculty of Veterinary, University of León, 24007, León, Spain.

Subjects: Phylogeny* ; Software* ; Computer Graphics*

  • Source: BMC bioinformatics [BMC Bioinformatics] 2025 Jun 05; Vol. 26 (1), pp. 154. Date of Electronic Publication: 2025 Jun 05.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

getphylo: rapid and automatic generation of multi-locus phylogenetic trees.

  • Authors : Booth TJ; The Novo Nordisk Foundation Center for Biosustainability, Danmarks Tekniske Universitet, Kongens Lyngby, Denmark. .; Shaw S

Subjects: Phylogeny* ; Software* ; Genomics*/Genomics*/Genomics*/methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2025 Jan 18; Vol. 26 (1), pp. 21. Date of Electronic Publication: 2025 Jan 18.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Root Digger: a root placement program for phylogenetic trees.

  • Authors : Bettisworth B; Computational Molecular Evolution Group, Heidelberg Institute for Theoretical Studies, Heidelberg, Germany. .; Stamatakis A

Subjects: Evolution, Molecular* ; Software*; Models, Genetic

  • Source: BMC bioinformatics [BMC Bioinformatics] 2021 May 01; Vol. 22 (1), pp. 225. Date of Electronic Publication: 2021 May 01.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

TreeShrink: fast and accurate detection of outlier long branches in collections of phylogenetic trees.

  • Authors : Mai U; Computer Science and Engineering, University of California at San Diego, San Diego, 92093, CA, USA.; Mirarab S

Subjects: Algorithms* ; Phylogeny* ; Software*

  • Source: BMC genomics [BMC Genomics] 2018 May 08; Vol. 19 (Suppl 5), pp. 272. Date of Electronic Publication: 2018 May 08.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Academic Journal

TREE2FASTA: a flexible Perl script for batch extraction of FASTA sequences from exploratory phylogenetic trees.

  • Authors : Sauvage T; Department of Biology, University of Louisiana at Lafayette, 410 E. Saint Mary Boulevard, Lafayette, LA, 70503, USA. .; Smithsonian Marine Station, 701 Seaway Drive, Fort Pierce, FL, 34949, USA. .

Subjects: Biodiversity* ; Databases, Nucleic Acid* ; Phylogeny*

  • Source: BMC research notes [BMC Res Notes] 2018 Mar 05; Vol. 11 (1), pp. 164. Date of Electronic Publication: 2018 Mar 05.Publisher: Biomed Central Country of Publication: England NLM ID: 101462768 Publication Model: Electronic Cited Medium: Internet ISSN: 1756-0500

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  • 1-10 of  675 results for ""Phylogenetic trees""