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Runtime phylogenetic analysis enables extreme subsampling for test-based problems

• Authors : Lalejini, Alexander; Sanson, Marcos; Garbus, Jack

Subjects: Computer Science - Neural and Evolutionary Computing

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phyloDB: A framework for large-scale phylogenetic analysis

• Authors : Lourenço, Bruno; Vaz, Cátia; Coimbra, Miguel E.

Subjects: Computer Science - Databases

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Phylogenetic analysis of pediatric tumors

• Authors : Andersson, Natalie

Subjects: Phylogenetics; neuroblastoma; Wilms tumor

• Source: Lund University, Faculty of Medicine Doctoral Dissertation Series. (2024:46)

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Testing plastomes and nuclear ribosomal DNA sequences as the next-generation DNA barcodes for species identification and phylogenetic analysis in Acer.

• Authors : Fu, Ning^1,2 (AUTHOR); Xu, Yong³ (AUTHOR); Jin, Lu¹ (AUTHOR)

• Source: BMC Plant Biology. 5/23/2024, Vol. 24 Issue 1, p1-15. 15p.

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Characterization of the complete mitochondrial genome of Spirobolus grahami (Diplopoda: Spirobolidae) with phylogenetic analysis.

• Authors : Zhang, Wenwen¹ (AUTHOR); Gan, Tianyi² (AUTHOR); Xu, Tangjun³ (AUTHOR)

• Source: Scientific Reports. 5/13/2024, Vol. 14 Issue 1, p1-9. 9p.

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Molecular characteristics and phylogenetic analysis of pigeon paramyxovirus type 1 isolates from pigeon meat farms in Shanghai (2009–2012).

• Authors : Sheng, Wenwei¹ (AUTHOR); Wang, Kexuan² (AUTHOR); Gui, Yaping¹ (AUTHOR)

• Source: Scientific Reports. 25/10/224, Vol. 14 Issue 1, p1-9. 9p.

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The complete chloroplast genome of Mussaenda pubescens and phylogenetic analysis.

• Authors : Zhou, Caibi^1,2 (AUTHOR); Tao, Fang^2,3 (AUTHOR); Long, Rupiao² (AUTHOR)

• Source: Scientific Reports. 4/21/2024, Vol. 14 Issue 1, p1-11. 11p.

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Sequence characteristics, genetic diversity and phylogenetic analysis of the Cucurbita ficifolia (Cucurbitaceae) chloroplasts genome.

• Authors : He, Shuilian^1,2 (AUTHOR); Xu, Bin¹ (AUTHOR); Chen, Siyun³ (AUTHOR)

• Source: BMC Genomics. 4/18/2024, Vol. 25 Issue 1, p1-15. 15p.

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Investigating pigeon circovirus infection in a pigeon farm: molecular detection, phylogenetic analysis and complete genome analysis.

• Authors : Li, Xiaobo^1,2,3 (AUTHOR) ; Wang, Shujing^1,2,3 (AUTHOR); Li, Wei^1,2,3 (AUTHOR)

• Source: BMC Genomics. 4/15/2024, Vol. 25 Issue 1, p1-11. 11p.

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Genetic evolution and phylogenetic analysis of porcine epidemic diarrhea virus strains circulating in and outside China with reference to a wild type virulent genotype CHYJ130330 reported from Guangdong Province, China.

• Authors : Mohiuddin, Mudassar^1,2,3 (AUTHOR); Deng, Shengchao^1,2 (AUTHOR); Zhu, Lisai^1,2 (AUTHOR)

• Source: Gut Pathogens. 4/8/2024, Vol. 16 Issue 1, p1-14. 14p.

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Molecular identification and phylogenetic analysis of chikungunya virus among dengue-negative patients in Kolkata, India.

• Authors : Chatterjee, Rajendra Prasad¹ (AUTHOR); Chatterjee, Aroni¹ (AUTHOR); Ansari, Sabbir¹ (AUTHOR)

• Source: PLoS ONE. 4/4/2024, Vol. 19 Issue 4, p1-15. 15p.

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Molecular Characterization and Phylogenetic Analysis of Flightin Gene in Vespa basalis (Hymenoptera, Vespidae).

• Authors : Ullah, Hasin¹ (AUTHOR) ; Huang, Xiaojuan¹ (AUTHOR); Zhou, Tong¹ (AUTHOR)

• Source: Animals (2076-2615). Mar2024, Vol. 14 Issue 6, p978. 10p.

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Detection and phylogenetic analysis of kinetoplast DNA of Leishmania infantum infected humans, domestic dogs and sandflies in Northwest Iran.

• Authors : Behniafar, Hamed^1,2 (AUTHOR); Taghipour, Niloofar³ (AUTHOR); Spotin, Adel⁴ (AUTHOR)

• Source: PLoS ONE. 3/13/2024, Vol. 19 Issue 3, p1-12. 12p.

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The Complete Chloroplast Genomes of Bulbophyllum (Orchidaceae) Species: Insight into Genome Structure Divergence and Phylogenetic Analysis.

• Authors : Wu, Yuwei¹ (AUTHOR) ; Zeng, Meng-Yao¹ (AUTHOR) ; Wang, Huan-Xin¹ (AUTHOR)

• Source: International Journal of Molecular Sciences. Mar2024, Vol. 25 Issue 5, p2665. 19p.

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Molecular identification and phylogenetic analysis of Alternaria perpunctulata GVKNSV7 causing leaf spot disease on Alternanthera philoxeroides (Mart.) Griseb: A first report in India.

• Authors : Gera, Vinay Kumar¹ ; Kumar, P. K. Ratna¹; Babu, Y. T. Rajesh¹

• Source: Journal of Applied & Natural Science. 2024, Vol. 16 Issue 1, p202-208. 7p.

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Genetic Variation and Phylogenetic Analysis of Influenza A/H3N2 Hemagglutinin Gene in Shiraz, Southern Iran: Implications for Influenza Control and Vaccine Development.

• Authors : Edalat, Fahime¹; Pirbonyeh, Neda^1,2; Sarvari, Jamal¹

• Source: Journal of Kermanshah University of Medical Sciences (2588-2562). Mar2024, Vol. 28 Issue 1, p1-8. 8p.

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Mitogenome features and phylogenetic analysis of red algae, Grateloupia cornea (Rhodophyta, Halymeniales)

• Authors : Patil, Maheshkumar Prakash¹ (AUTHOR); Kim, Young-Ryun² (AUTHOR); Nakashita, Shinya³ (AUTHOR)

• Source: Journal of Genetics. Jun2024, Vol. 103 Issue 1, p1-9. 9p.

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Characteristics and phylogenetic analysis of the complete chloroplast genome of Cornus hongkongensis Hemsl. 1888 (Cornaceae)

• Authors : Ze Liu; Liping He; Xiaorui Cui

Subjects: Chloroplast genome; Cornaceae; Cornus hongkongensis

• Source: Mitochondrial DNA. Part B. Resources, Vol 9, Iss 5, Pp 672-677 (2024)

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Mitochondrial genomic characteristics and phylogenetic analysis of a brewing fungus, Rhizopus microsporus Tiegh. 1875 (Mucorales: Rhizopodaceae)

• Authors : Yue Deng; Guangjiu Chen; Xuedong Bao

Subjects: Mitochondrial genome; brewing fungus; evolution

• Source: Mitochondrial DNA. Part B. Resources, Vol 9, Iss 5, Pp 657-662 (2024)

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The complete chloroplast genome sequence and phylogenetic analysis of Asplenium antiquum Makino 1929, an Endangered species in Korea

• Authors : I-Jin Choi; Ho Jun Joh; Wan-Hee Lee

Subjects: Aspleniaceae; asplenium antiquum; chloroplast genome

• Source: Mitochondrial DNA. Part B. Resources, Vol 9, Iss 5, Pp 663-666 (2024)

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Complete mitochondrial DNA sequence of Alboglossiphonia lata Oka, 1910 (Rhynchobdellida: Glossiphoniidae) and its phylogenetic analysis

• Authors : Panpan Jin; Yu Tian; Erhuan Zang

Subjects: Mitochondrial genome; Alboglossiphonia lata; phylogentic analysis

• Source: Mitochondrial DNA. Part B. Resources, Vol 9, Iss 5, Pp 652-656 (2024)

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The complete plastome of Acalypha australis (Euphorbiaceae) and its phylogenetic analysis

• Authors : Hongqin Li; Changhao Ma; Liqiang Wang

Subjects: Acalypha australis; Euphorbiaceae; plastome

• Source: Mitochondrial DNA. Part B. Resources, Vol 9, Iss 5, Pp 636-640 (2024)

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The complete chloroplast genome of Oxytropis ochrocephala Bunge 1874 (Fabaceae) and its phylogenetic analysis

• Authors : XiaYu Hu; YuPing Liu; JinYuan Chen

Subjects: Oxytropis ochrocephala; chloroplast genome; IR loss

• Source: Mitochondrial DNA. Part B. Resources, Vol 9, Iss 5, Pp 641-646 (2024)

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Determination of hepatitis C virus subtype prevalent in Sindh, Pakistan: a phylogenetic analysis

• Authors : Saba Farooq; Sirmast Faiz; Atia-tul Wahab

Subjects: Hepatitis; Hepatitis C virus; Prevalence

• Source: Scientific Reports, Vol 14, Iss 1, Pp 1-9 (2024)

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Complete mitochondrial genome data and phylogenetic analysis of Papilio macilentus Janson, 1877 (Lepidoptera: Papilionoidea: Papilionidae)

• Authors : Yun-Fei Wu; Wei-Hao Yang; Ai Jin

Subjects: Papilio macilentus; next-generation sequencing; mitogenome

• Source: Mitochondrial DNA. Part B. Resources, Vol 9, Iss 5, Pp 631-635 (2024)

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