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Academic Journal

Full-length 16S rRNA nanopore sequencing enables species resolution of Fusobacterium associated with colorectal cancer

Subjects: colorectal cancer; full-length 16S rRNA; Fusobacterium species identification

  • Source: Gut microbes. 18(1)

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Academic Journal

Low power reprogrammable DNA basecaller with an efficient HMM accelerator for real time nanopore sequencing

Subjects: Accelerator; DNA basecalling; Hidden Markov Model (HMM)

  • Source: Scientific Reports. 16(1)

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Academic Journal

NanoLoop: A Deep Learning Framework Leveraging Nanopore Sequencing for Chromatin Loop Prediction.

  • Authors : Huang W; School of Computer Science and Engineering, Central South University, Changsha, China.; Tang L

Subjects: Nanopore Sequencing*/Nanopore Sequencing*/Nanopore Sequencing*/methods ; Chromatin*/Chromatin*/Chromatin*/genetics ; Deep Learning*

  • Source: Advanced science (Weinheim, Baden-Wurttemberg, Germany) [Adv Sci (Weinh)] 2026 Apr; Vol. 13 (24), pp. e17692. Date of Electronic Publication: 2026 Feb 13.Publisher: WILEY-VCH Country of Publication: Germany NLM ID: 101664569 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2198-3844

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Academic Journal

First whole-genome assembly of the Galápagos Petrel (Pterodroma phaeopygia) using Oxford Nanopore sequencing to advance conservation genomics in a critically endangered seabird.

  • Authors : Sessi IR; Department of Biology, San Francisco State University, San Francisco, CA 94132, United States.; Institute for Biodiversity Science and Sustainability, California Academy of Sciences, San Francisco, CA 94118, United States.

Subjects: Genomics*/Genomics*/Genomics*/methods ; Birds*/Birds*/Birds*/genetics ; Endangered Species*

  • Source: G3 (Bethesda, Md.) [G3 (Bethesda)] 2026 Mar 04; Vol. 16 (3).Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Nanopore sequencing of PCR products enables multicopy gene family reconstruction

Subjects: Multi-copy genes; Nanopore sequencing; PCR recombination

  • Source: Computational and Structural Biotechnology Journal. 21:3656-3664

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Academic Journal

Targeted long-read nanopore sequencing as a complementary approach for detecting STRC variants and distinguishing the STRCP1 pseudogene.

  • Authors : Moteki H; Department of Hearing Implant Sciences, Shinshu University School of Medicine, 3-1-1 Asahi, Matsumoto, 390-8621, Nagano, Japan. .; Department of Otolaryngology, Aizawa Hospital, Matsumoto, Japan. .

Subjects: Nanopore Sequencing*/Nanopore Sequencing*/Nanopore Sequencing*/methods ; Hearing Loss, Sensorineural*/Hearing Loss, Sensorineural*/Hearing Loss, Sensorineural*/genetics ; Pseudogenes*

  • Source: Scientific reports [Sci Rep] 2025 Dec 22; Vol. 15 (1), pp. 44261. Date of Electronic Publication: 2025 Dec 22.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Evaluation of a Probe-Based Enrichment Protocol for Nanopore Sequencing of Zoonotic Viruses.

  • Authors : Hawes K; Laboratory of Virology, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA.; Greene B

Subjects: Nanopore Sequencing*/Nanopore Sequencing*/Nanopore Sequencing*/methods ; Zoonoses*/Zoonoses*/Zoonoses*/virology ; Viruses*/Viruses*/Viruses*/genetics

  • Source: Viruses [Viruses] 2025 Oct 31; Vol. 17 (11). Date of Electronic Publication: 2025 Oct 31.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101509722 Publication Model: Electronic Cited Medium: Internet ISSN: 1999-4915

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Academic Journal

Novel multiplex family-wide PCR and Nanopore sequencing of amplicons (FP-NSA) approach for surveillance of influenza- and coronaviruses in humans and animals.

  • Authors : Meki IK; Animal Production and Health Laboratory, Department of Nuclear Sciences and Applications, Joint FAOIAEA Centre of Nuclear Techniques in Food and AgricultureInternational Atomic Energy Agency, Wagramer Strasse 5, P.O. Box 100, 1400, Vienna, Austria. .; Ahn KB

Subjects: Nanopore Sequencing*/Nanopore Sequencing*/Nanopore Sequencing*/methods ; Coronavirus*/Coronavirus*/Coronavirus*/genetics ; Coronavirus*/Coronavirus*/Coronavirus*/isolation & purification

  • Source: Genome medicine [Genome Med] 2025 Oct 17; Vol. 17 (1), pp. 123. Date of Electronic Publication: 2025 Oct 17.Publisher: BioMed Central Country of Publication: England NLM ID: 101475844 Publication Model: Electronic Cited Medium: Internet ISSN: 1756-994X

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Academic Journal

A reference-guided iterative approach to polish the nanopore sequencing basecalling for therapeutic RNA quality control.

  • Authors : Wang Z; Department of Pharmacy Practice and Science, University of Arizona, Tucson, AZ, USA.; Tu MJ

Subjects: Nanopore Sequencing*/Nanopore Sequencing*/Nanopore Sequencing*/methods ; Nanopore Sequencing*/Nanopore Sequencing*/Nanopore Sequencing*/standards ; RNA, Messenger*/RNA, Messenger*/RNA, Messenger*/genetics

  • Source: Communications biology [Commun Biol] 2025 Oct 01; Vol. 8 (1), pp. 1406. Date of Electronic Publication: 2025 Oct 01.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Nanopore sequencing-derived methylation biomarker prediction for methylation-specific PCR in patients with head and neck squamous cell carcinoma.

  • Authors : Meyer D; RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany. .; oncgnostics GmbH, Löbstedter Str. 41, 07749, Jena, Germany. .

Subjects: Squamous Cell Carcinoma of Head and Neck*/Squamous Cell Carcinoma of Head and Neck*/Squamous Cell Carcinoma of Head and Neck*/genetics ; Head and Neck Neoplasms*/Head and Neck Neoplasms*/Head and Neck Neoplasms*/genetics ; Nanopore Sequencing*/Nanopore Sequencing*/Nanopore Sequencing*/methods

  • Source: Clinical epigenetics [Clin Epigenetics] 2025 Sep 13; Vol. 17 (1), pp. 149. Date of Electronic Publication: 2025 Sep 13.Publisher: Biomed Central Country of Publication: Germany NLM ID: 101516977 Publication Model: Electronic Cited Medium: Internet ISSN: 1868-7083

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  • 1-10 of  17,738 results for ""Nanopore Sequencing""