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Academic Journal

Porter 6: Protein Secondary Structure Prediction by Leveraging Pre-Trained Language Models (PLMs).

  • Authors : Alanazi W; School of Computer Science, University College Dublin (UCD), D04 V1W8 Dublin, Ireland.; Department of Computer Science, College of Science, Northern Border University, Arar P.O. Box 2014, Saudi Arabia.

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Protein Structure, Secondary* ; Natural Language Processing*

  • Source: International journal of molecular sciences [Int J Mol Sci] 2024 Dec 27; Vol. 26 (1). Date of Electronic Publication: 2024 Dec 27.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

MHTAPred-SS: A Highly Targeted Autoencoder-Driven Deep Multi-Task Learning Framework for Accurate Protein Secondary Structure Prediction.

  • Authors : Feng R; Qingdao Institute of Software, College of Computer Science and Technology, China University of Petroleum (East China), Qingdao 266580, China.; Wang X

Subjects: Protein Structure, Secondary* ; Proteins*/Proteins*/Proteins*/chemistry; Deep Learning

  • Source: International journal of molecular sciences [Int J Mol Sci] 2024 Dec 15; Vol. 25 (24). Date of Electronic Publication: 2024 Dec 15.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

Prediction of Protein Secondary Structures Based on Substructural Descriptors of Molecular Fragments.

  • Authors : Zakharov OS; Department of Bioinformatics, Pirogov Russian National Research Medical University, 117997 Moscow, Russia.; Rudik AV

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Databases, Protein* ; Protein Structure, Secondary*

  • Source: International journal of molecular sciences [Int J Mol Sci] 2024 Nov 21; Vol. 25 (23). Date of Electronic Publication: 2024 Nov 21.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

Impact of Multi-Factor Features on Protein Secondary Structure Prediction.

  • Authors : Dong B; College of Computer and Control Engineering, Northeast Forestry University, Harbin 150040, China.; Liu Z

Subjects: Protein Structure, Secondary* ; Proteins*/Proteins*/Proteins*/chemistry ; Machine Learning*

  • Source: Biomolecules [Biomolecules] 2024 Sep 13; Vol. 14 (9). Date of Electronic Publication: 2024 Sep 13.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101596414 Publication Model: Electronic Cited Medium: Internet ISSN: 2218-273X

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Academic Journal

Prediction of protein secondary structure by the improved TCN-BiLSTM-MHA model with knowledge distillation.

  • Authors : Zhao L; Agricultural Science and Engineering School, Liaocheng University, Liaocheng, 252059, China.; Li J

Subjects: Protein Structure, Secondary* ; Proteins*/Proteins*/Proteins*/chemistry; Deep Learning

  • Source: Scientific reports [Sci Rep] 2024 Jul 17; Vol. 14 (1), pp. 16488. Date of Electronic Publication: 2024 Jul 17.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Effects of Alkaline Extraction pH on Amino Acid Compositions, Protein Secondary Structures, Thermal Stability, and Functionalities of Brewer's Spent Grain Proteins.

  • Authors : Hadinoto K; School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore 637459, Singapore.; Ling JK

Subjects: Amino Acids*/Amino Acids*/Amino Acids*/chemistry ; Amino Acids*/Amino Acids*/Amino Acids*/analysis ; Protein Structure, Secondary*

  • Source: International journal of molecular sciences [Int J Mol Sci] 2024 Jun 08; Vol. 25 (12). Date of Electronic Publication: 2024 Jun 08.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

DeepSS2GO: protein function prediction from secondary structure.

  • Authors : Song FV; Department of Chemical Biology, School of Life Sciences, Southern University of Science and Technology, Xueyuan Avenue, 518055, Shenzhen, China.; Su J

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/metabolism ; Proteins*/Proteins*/Proteins*/genetics

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 Mar 27; Vol. 25 (3).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

AlphaFold Protein Structure Database in 2024: providing structure coverage for over 214 million protein sequences.

  • Authors : Varadi M; European Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.; Bertoni D

Subjects: Artificial Intelligence* ; Proteome* ; Protein Structure, Secondary*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jan 05; Vol. 52 (D1), pp. D368-D375.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Explainable Deep Hypergraph Learning Modeling the Peptide Secondary Structure Prediction.

  • Authors : Jiang Y; School of Software, Shandong University, Jinan, Shandong, 250101, China.; Joint SDU-NTU Centre for Artificial Intelligence Research (C-FAIR), Shandong University, Jinan, Shandong, 250101, China.

Subjects: Peptides*/Peptides*/Peptides*/chemistry ; Protein Structure, Secondary* ; Algorithms*

  • Source: Advanced science (Weinheim, Baden-Wurttemberg, Germany) [Adv Sci (Weinh)] 2023 Apr; Vol. 10 (11), pp. e2206151. Date of Electronic Publication: 2023 Feb 15.Publisher: WILEY-VCH Country of Publication: Germany NLM ID: 101664569 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2198-3844

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Academic Journal

Lessons from Deep Learning Structural Prediction of Multistate Multidomain Proteins-The Case Study of Coiled-Coil NOD-like Receptors.

  • Authors : Șulea TA; Department of Bioinformatics and Structural Biochemistry, Institute of Biochemistry of the Romanian Academy, Splaiul Independentei 296, 060031 Bucharest, Romania.; Martin EC

Subjects: Deep Learning*; Models, Molecular ; Protein Domains

  • Source: International journal of molecular sciences [Int J Mol Sci] 2025 Jan 09; Vol. 26 (2). Date of Electronic Publication: 2025 Jan 09.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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  • 1-10 of  42,118 results for ""Protein Structure, Secondary""